RNA–Protein interactions for RNA: ENST00000521996.1

AF117829.1-208, humanhuman

TSL 3 BASIC

Gene AF117829.1, Length 915 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AF117829.1-208ENST00000521996 AEBP2Q6ZN18 517 aaPredicted RBP25.59■■□□□ 1.69
AF117829.1-208ENST00000521996 CHIC1Q5VXU3 224 aa24.36■■□□□ 1.49
AF117829.1-208ENST00000521996 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
AF117829.1-208ENST00000521996 PHF23Q9BUL5 403 aaPredicted RBP21.56■■□□□ 1.04
AF117829.1-208ENST00000521996 FOXD1Q16676 465 aa20.33■□□□□ 0.85
AF117829.1-208ENST00000521996 PLPPR3Q6T4P5 718 aa19.51■□□□□ 0.71
AF117829.1-208ENST00000521996 PPP6R1Q9UPN7 881 aa19.08■□□□□ 0.64
AF117829.1-208ENST00000521996 ADRA2BP18089 450 aa19.06■□□□□ 0.64
AF117829.1-208ENST00000521996 PIAS4Q8N2W9 510 aaPredicted RBP19.06■□□□□ 0.64
AF117829.1-208ENST00000521996 MSH5O43196 834 aa18.98■□□□□ 0.63
AF117829.1-208ENST00000521996 POTEDQ86YR6 584 aa18.41■□□□□ 0.54
AF117829.1-208ENST00000521996 MAPK8IP2Q13387 824 aaPredicted RBP17.48■□□□□ 0.39
AF117829.1-208ENST00000521996 SCAF1Q9H7N4 1312 aaKnown RBP17.4■□□□□ 0.38
AF117829.1-208ENST00000521996 DMRT2Q9Y5R5 561 aa17.29■□□□□ 0.36
AF117829.1-208ENST00000521996 PPP4R3CPQ6ZMV5 832 aa17.13■□□□□ 0.33
AF117829.1-208ENST00000521996 CNKSR2Q8WXI2 1034 aa16.77■□□□□ 0.28
AF117829.1-208ENST00000521996 DCAF8L1A6NGE4 600 aa16.72■□□□□ 0.27
AF117829.1-208ENST00000521996 HOXD11P31277 338 aaPredicted RBP16.66■□□□□ 0.26
AF117829.1-208ENST00000521996 RNF216Q9NWF9 866 aaPredicted RBP16.58■□□□□ 0.24
AF117829.1-208ENST00000521996 NCBP3Q53F19 620 aaKnown RBP16.5■□□□□ 0.23
AF117829.1-208ENST00000521996 CACNB1Q02641 598 aaPredicted RBP16.3■□□□□ 0.2
AF117829.1-208ENST00000521996 NPM3O75607 178 aaKnown RBP16.26■□□□□ 0.19
AF117829.1-208ENST00000521996 RNF39Q9H2S5 420 aa16.19■□□□□ 0.18
AF117829.1-208ENST00000521996 KCNA4P22459 653 aa16.04■□□□□ 0.16
AF117829.1-208ENST00000521996 DNAJC5BQ9UF47 199 aa16■□□□□ 0.15
AF117829.1-208ENST00000521996 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.97■□□□□ 0.15
AF117829.1-208ENST00000521996 C1QBPQ07021 282 aaKnown RBP15.96■□□□□ 0.15
AF117829.1-208ENST00000521996 U3KPZ7 1027 aaPredicted RBP15.61■□□□□ 0.09
AF117829.1-208ENST00000521996 SLC4A2P04920 1241 aa15.49■□□□□ 0.07
AF117829.1-208ENST00000521996 CAPN15O75808 1086 aa15.39■□□□□ 0.05
AF117829.1-208ENST00000521996 SPINK5Q9NQ38 1064 aaPredicted RBP15.39■□□□□ 0.05
AF117829.1-208ENST00000521996 DSG3P32926 999 aa15.21■□□□□ 0.03
AF117829.1-208ENST00000521996 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.17■□□□□ 0.02
AF117829.1-208ENST00000521996 TRHP20396 242 aaPredicted RBP15.17■□□□□ 0.02
AF117829.1-208ENST00000521996 APLP2Q06481 763 aa15.17■□□□□ 0.02
AF117829.1-208ENST00000521996 HNRNPUL2Q1KMD3 747 aaKnown RBP15.17■□□□□ 0.02
AF117829.1-208ENST00000521996 SLC4A1APQ9BWU0 796 aaKnown RBP15.16■□□□□ 0.02
AF117829.1-208ENST00000521996 SAMD1Q6SPF0 538 aaPredicted RBP15.1■□□□□ 0.01
AF117829.1-208ENST00000521996 ZNF219Q9P2Y4 722 aaPredicted RBP15.08■□□□□ 0
AF117829.1-208ENST00000521996 ABCB7O75027 752 aa15.05■□□□□ -0
AF117829.1-208ENST00000521996 MYCNP04198 464 aaPredicted RBP15.03■□□□□ -0
AF117829.1-208ENST00000521996 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
AF117829.1-208ENST00000521996 POLA2Q14181 598 aa14.74□□□□□ -0.05
AF117829.1-208ENST00000521996 ZBTB22O15209 634 aa14.72□□□□□ -0.05
AF117829.1-208ENST00000521996 ATF5Q9Y2D1 282 aaPredicted RBP14.69□□□□□ -0.06
AF117829.1-208ENST00000521996 RBM42Q9BTD8 480 aaKnown RBP14.52□□□□□ -0.09
AF117829.1-208ENST00000521996 POTEHQ6S545 545 aa14.46□□□□□ -0.09
AF117829.1-208ENST00000521996 EHMT2Q96KQ7 1210 aa14.43□□□□□ -0.1
AF117829.1-208ENST00000521996 ZBTB12Q9Y330 459 aaPredicted RBP14.41□□□□□ -0.1
AF117829.1-208ENST00000521996 ATXN8OSP0DMR3 200 aa14.4□□□□□ -0.1
AF117829.1-208ENST00000521996 OSCARQ8IYS5 282 aa14.28□□□□□ -0.12
AF117829.1-208ENST00000521996 CSRNP3Q8WYN3 585 aa14.24□□□□□ -0.13
AF117829.1-208ENST00000521996 AKT1S1Q96B36 256 aa14.19□□□□□ -0.14
AF117829.1-208ENST00000521996 CHRDL2Q6WN34 429 aa14.18□□□□□ -0.14
AF117829.1-208ENST00000521996 FBLN2P98095 1184 aa14.13□□□□□ -0.15
AF117829.1-208ENST00000521996 REM2Q8IYK8 340 aaPredicted RBP14.08□□□□□ -0.16
AF117829.1-208ENST00000521996 MKRN4PQ13434 485 aaPredicted RBP14.01□□□□□ -0.17
AF117829.1-208ENST00000521996 SPDYE2BA6NHP3 402 aa13.97□□□□□ -0.17
AF117829.1-208ENST00000521996 SPDYE6P0CI01 402 aa13.97□□□□□ -0.17
AF117829.1-208ENST00000521996 SPDYE2Q495Y8 402 aa13.97□□□□□ -0.17
AF117829.1-208ENST00000521996 PITPNM1O00562 1244 aa13.93□□□□□ -0.18
AF117829.1-208ENST00000521996 ZNF692Q9BU19 519 aaPredicted RBP13.86□□□□□ -0.19
AF117829.1-208ENST00000521996 PIP4P2Q8N4L2 257 aa13.85□□□□□ -0.19
AF117829.1-208ENST00000521996 SSUH2Q9Y2M2 353 aa13.78□□□□□ -0.2
AF117829.1-208ENST00000521996 CLEC11AQ9Y240 323 aa13.77□□□□□ -0.21
AF117829.1-208ENST00000521996 FXR2P51116 673 aaKnown RBP eCLIP13.75□□□□□ -0.21
AF117829.1-208ENST00000521996 SPDYE1Q8NFV5 336 aaPredicted RBP13.73□□□□□ -0.21
AF117829.1-208ENST00000521996 PABPN1Q86U42 306 aaKnown RBP eCLIP13.67□□□□□ -0.22
AF117829.1-208ENST00000521996 HAX1O00165 279 aa13.64□□□□□ -0.23
AF117829.1-208ENST00000521996 PRKAR2AP13861 404 aaKnown RBP13.59□□□□□ -0.23
AF117829.1-208ENST00000521996 SP7Q8TDD2 431 aaPredicted RBP13.58□□□□□ -0.24
AF117829.1-208ENST00000521996 NISCHQ9Y2I1 1504 aa13.54□□□□□ -0.24
AF117829.1-208ENST00000521996 PRR29P0C7W0 189 aa13.51□□□□□ -0.25
AF117829.1-208ENST00000521996 CHADLQ6NUI6 762 aa13.48□□□□□ -0.25
AF117829.1-208ENST00000521996 EVX2Q03828 476 aa13.44□□□□□ -0.26
AF117829.1-208ENST00000521996 SPDYE4A6NLX3 237 aa13.42□□□□□ -0.26
AF117829.1-208ENST00000521996 C19orf67A6NJJ6 358 aa13.31□□□□□ -0.28
AF117829.1-208ENST00000521996 STAG3Q9UJ98 1225 aa13.26□□□□□ -0.29
AF117829.1-208ENST00000521996 FARP1Q9Y4F1 1045 aaPredicted RBP13.25□□□□□ -0.29
AF117829.1-208ENST00000521996 CD44P16070 742 aaKnown RBP13.17□□□□□ -0.3
AF117829.1-208ENST00000521996 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
AF117829.1-208ENST00000521996 GABBR2O75899 941 aa13.13□□□□□ -0.31
AF117829.1-208ENST00000521996 PROM2Q8N271 834 aa13.01□□□□□ -0.33
AF117829.1-208ENST00000521996 ZRANB1Q9UGI0 708 aa13.01□□□□□ -0.33
AF117829.1-208ENST00000521996 NPM1P06748 294 aaKnown RBP eCLIP12.94□□□□□ -0.34
AF117829.1-208ENST00000521996 PAK3O75914 559 aaPredicted RBP12.92□□□□□ -0.34
AF117829.1-208ENST00000521996 ZNF579Q8NAF0 562 aaKnown RBP12.92□□□□□ -0.34
AF117829.1-208ENST00000521996 MNX1P50219 401 aaPredicted RBP12.91□□□□□ -0.34
AF117829.1-208ENST00000521996 CLCN6P51797 869 aa12.87□□□□□ -0.35
AF117829.1-208ENST00000521996 FKBP8Q14318 412 aa12.86□□□□□ -0.35
AF117829.1-208ENST00000521996 POTEIP0CG38 1075 aa12.84□□□□□ -0.35
AF117829.1-208ENST00000521996 PHF12Q96QT6 1004 aa12.84□□□□□ -0.35
AF117829.1-208ENST00000521996 DCBLD2Q96PD2 775 aa12.83□□□□□ -0.36
AF117829.1-208ENST00000521996 MIER1Q8N108 512 aa12.82□□□□□ -0.36
AF117829.1-208ENST00000521996 GALR2O43603 387 aaPredicted RBP12.81□□□□□ -0.36
AF117829.1-208ENST00000521996 PLEKHG5O94827 1062 aa12.79□□□□□ -0.36
AF117829.1-208ENST00000521996 TSPYL2Q9H2G4 693 aaPredicted RBP12.77□□□□□ -0.37
AF117829.1-208ENST00000521996 LHX8Q68G74 356 aa12.75□□□□□ -0.37
AF117829.1-208ENST00000521996 PLCD3Q8N3E9 789 aa12.74□□□□□ -0.37
AF117829.1-208ENST00000521996 MS4A3Q96HJ5 214 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 271.8 ms