RNA–Protein interactions for RNA: ENST00000262227.7

ARHGAP28-201, Transcript of Rho GTPase activating protein 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGAP28, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP28-201ENST00000262227 NISCHQ9Y2I1 1504 aa12.69□□□□□ -0.38
ARHGAP28-201ENST00000262227 DCAF8L2P0C7V8 631 aa12.56□□□□□ -0.4
ARHGAP28-201ENST00000262227 FAM9AQ8IZU1 332 aaPredicted RBP11.64□□□□□ -0.55
ARHGAP28-201ENST00000262227 SUPT5HO00267 1087 aaKnown RBP11.57□□□□□ -0.56
ARHGAP28-201ENST00000262227 SHROOM4Q9ULL8 1493 aa11.48□□□□□ -0.57
ARHGAP28-201ENST00000262227 APLP2Q06481 763 aa11.31□□□□□ -0.6
ARHGAP28-201ENST00000262227 ABCC9O60706 1549 aa10.99□□□□□ -0.65
ARHGAP28-201ENST00000262227 TRIM41Q8WV44 630 aa10.96□□□□□ -0.65
ARHGAP28-201ENST00000262227 EHMT2Q96KQ7 1210 aa10.88□□□□□ -0.67
ARHGAP28-201ENST00000262227 CCDC180Q9P1Z9 1646 aa10.82□□□□□ -0.68
ARHGAP28-201ENST00000262227 UBTFP17480 764 aaKnown RBP10.82□□□□□ -0.68
ARHGAP28-201ENST00000262227 ATP1B4Q9UN42 357 aaPredicted RBP10.81□□□□□ -0.68
ARHGAP28-201ENST00000262227 PELP1Q8IZL8 1130 aaKnown RBP10.78□□□□□ -0.68
ARHGAP28-201ENST00000262227 PABPN1Q86U42 306 aaKnown RBP eCLIP10.69□□□□□ -0.7
ARHGAP28-201ENST00000262227 RANGAP1P46060 587 aaPredicted RBP10.68□□□□□ -0.7
ARHGAP28-201ENST00000262227 ZEB1P37275 1124 aaPredicted RBP10.64□□□□□ -0.71
ARHGAP28-201ENST00000262227 MYT1LQ9UL68 1186 aa10.62□□□□□ -0.71
ARHGAP28-201ENST00000262227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.62□□□□□ -0.71
ARHGAP28-201ENST00000262227 HNRNPUL2Q1KMD3 747 aaKnown RBP10.62□□□□□ -0.71
ARHGAP28-201ENST00000262227 RB1CC1Q8TDY2 1594 aa10.62□□□□□ -0.71
ARHGAP28-201ENST00000262227 NACADO15069 1562 aa10.51□□□□□ -0.73
ARHGAP28-201ENST00000262227 ZCCHC6Q5VYS8 1495 aaKnown RBP10.5□□□□□ -0.73
ARHGAP28-201ENST00000262227 TTBK1Q5TCY1 1321 aaPredicted RBP10.5□□□□□ -0.73
ARHGAP28-201ENST00000262227 SCRIBQ14160 1630 aa10.49□□□□□ -0.73
ARHGAP28-201ENST00000262227 CCER1Q8TC90 406 aaPredicted RBP10.46□□□□□ -0.74
ARHGAP28-201ENST00000262227 PCGF6Q9BYE7 350 aa10.42□□□□□ -0.74
ARHGAP28-201ENST00000262227 FBLN2P98095 1184 aa10.36□□□□□ -0.75
ARHGAP28-201ENST00000262227 CDK11AQ9UQ88 783 aaPredicted RBP10.33□□□□□ -0.76
ARHGAP28-201ENST00000262227 NPM1P06748 294 aaKnown RBP eCLIP10.31□□□□□ -0.76
ARHGAP28-201ENST00000262227 CENPBP07199 599 aaPredicted RBP10.29□□□□□ -0.76
ARHGAP28-201ENST00000262227 CHIC1Q5VXU3 224 aa10.29□□□□□ -0.76
ARHGAP28-201ENST00000262227 MYT1Q01538 1121 aa10.29□□□□□ -0.76
ARHGAP28-201ENST00000262227 TRIM26Q12899 539 aaPredicted RBP10.28□□□□□ -0.76
ARHGAP28-201ENST00000262227 DCAF1Q9Y4B6 1507 aa10.27□□□□□ -0.77
ARHGAP28-201ENST00000262227 ITGAEP38570 1179 aa10.22□□□□□ -0.77
ARHGAP28-201ENST00000262227 NEFLP07196 543 aa10.21□□□□□ -0.77
ARHGAP28-201ENST00000262227 ESF1Q9H501 851 aaKnown RBP10.21□□□□□ -0.77
ARHGAP28-201ENST00000262227 FAM50AQ14320 339 aaKnown RBP10.19□□□□□ -0.78
ARHGAP28-201ENST00000262227 BAZ1BQ9UIG0 1483 aaKnown RBP10.17□□□□□ -0.78
ARHGAP28-201ENST00000262227 CSRNP3Q8WYN3 585 aa10.17□□□□□ -0.78
ARHGAP28-201ENST00000262227 TRIM52Q96A61 297 aa10.15□□□□□ -0.78
ARHGAP28-201ENST00000262227 ERCC6Q03468 1493 aa10.14□□□□□ -0.79
ARHGAP28-201ENST00000262227 CHMP7Q8WUX9 453 aaPredicted RBP10.12□□□□□ -0.79
ARHGAP28-201ENST00000262227 ACIN1Q9UKV3 1341 aaKnown RBP10.11□□□□□ -0.79
ARHGAP28-201ENST00000262227 BAZ1AQ9NRL2 1556 aaPredicted RBP10.11□□□□□ -0.79
ARHGAP28-201ENST00000262227 MYO15BQ96JP2 1530 aa10.11□□□□□ -0.79
ARHGAP28-201ENST00000262227 SLC4A1APQ9BWU0 796 aaKnown RBP10.09□□□□□ -0.79
ARHGAP28-201ENST00000262227 POLR3GLQ9BT43 218 aa10.08□□□□□ -0.8
ARHGAP28-201ENST00000262227 EEA1Q15075 1411 aa10.08□□□□□ -0.8
ARHGAP28-201ENST00000262227 ERICH6Q7L0X2 663 aa10.06□□□□□ -0.8
ARHGAP28-201ENST00000262227 PPARGC1BQ86YN6 1023 aaKnown RBP10.05□□□□□ -0.8
ARHGAP28-201ENST00000262227 SMARCA2P51531 1590 aa10.04□□□□□ -0.8
ARHGAP28-201ENST00000262227 BCANQ96GW7 911 aa10.04□□□□□ -0.8
ARHGAP28-201ENST00000262227 LOC105371045A0A1W2PR82 267 aa10.02□□□□□ -0.81
ARHGAP28-201ENST00000262227 STAG3Q9UJ98 1225 aa9.99□□□□□ -0.81
ARHGAP28-201ENST00000262227 PDS5BQ9NTI5 1447 aa9.99□□□□□ -0.81
ARHGAP28-201ENST00000262227 NEFMP07197 916 aa9.99□□□□□ -0.81
ARHGAP28-201ENST00000262227 ZNF777Q9ULD5 760 aaPredicted RBP9.98□□□□□ -0.81
ARHGAP28-201ENST00000262227 RSF1Q96T23 1441 aaPredicted RBP9.98□□□□□ -0.81
ARHGAP28-201ENST00000262227 P3H3Q8IVL6 736 aa9.97□□□□□ -0.81
ARHGAP28-201ENST00000262227 KIF27Q86VH2 1401 aa9.97□□□□□ -0.81
ARHGAP28-201ENST00000262227 TSPY4P0CV99 314 aa9.94□□□□□ -0.82
ARHGAP28-201ENST00000262227 TSPY10P0CW01 314 aa9.94□□□□□ -0.82
ARHGAP28-201ENST00000262227 WRNQ14191 1432 aaPredicted RBP eCLIP9.93□□□□□ -0.82
ARHGAP28-201ENST00000262227 PLEKHD1A6NEE1 506 aa9.91□□□□□ -0.82
ARHGAP28-201ENST00000262227 MTUS2Q5JR59 1369 aa9.91□□□□□ -0.82
ARHGAP28-201ENST00000262227 DAXXQ9UER7 740 aaPredicted RBP9.89□□□□□ -0.83
ARHGAP28-201ENST00000262227 ARID3CA6NKF2 412 aa9.89□□□□□ -0.83
ARHGAP28-201ENST00000262227 GOLGA3Q08378 1498 aa9.88□□□□□ -0.83
ARHGAP28-201ENST00000262227 ZNF326Q5BKZ1 582 aaKnown RBP9.86□□□□□ -0.83
ARHGAP28-201ENST00000262227 NEUROD1Q13562 356 aa9.86□□□□□ -0.83
ARHGAP28-201ENST00000262227 CEP164Q9UPV0 1460 aa9.85□□□□□ -0.83
ARHGAP28-201ENST00000262227 ZBTB47Q9UFB7 747 aaPredicted RBP9.85□□□□□ -0.83
ARHGAP28-201ENST00000262227 CECR2Q9BXF3 1484 aa9.83□□□□□ -0.84
ARHGAP28-201ENST00000262227 CHGAP10645 457 aaKnown RBP9.83□□□□□ -0.84
ARHGAP28-201ENST00000262227 HRCP23327 699 aa9.83□□□□□ -0.84
ARHGAP28-201ENST00000262227 CARMIL2Q6F5E8 1435 aa9.82□□□□□ -0.84
ARHGAP28-201ENST00000262227 CLIP1P30622 1438 aa9.82□□□□□ -0.84
ARHGAP28-201ENST00000262227 ABCC8Q09428 1581 aa9.81□□□□□ -0.84
ARHGAP28-201ENST00000262227 ANP32CO43423 234 aa9.81□□□□□ -0.84
ARHGAP28-201ENST00000262227 YTHDC1Q96MU7 727 aaKnown RBP9.8□□□□□ -0.84
ARHGAP28-201ENST00000262227 TONSLQ96HA7 1378 aa9.79□□□□□ -0.84
ARHGAP28-201ENST00000262227 FHAD1B1AJZ9 1412 aa9.79□□□□□ -0.84
ARHGAP28-201ENST00000262227 TOP2AP11388 1531 aaKnown RBP9.76□□□□□ -0.85
ARHGAP28-201ENST00000262227 PPP1R15AO75807 674 aaPredicted RBP9.76□□□□□ -0.85
ARHGAP28-201ENST00000262227 ARID4BQ4LE39 1312 aaPredicted RBP9.76□□□□□ -0.85
ARHGAP28-201ENST00000262227 CADPSQ9ULU8 1353 aa9.75□□□□□ -0.85
ARHGAP28-201ENST00000262227 HDGFP51858 240 aaKnown RBP9.75□□□□□ -0.85
ARHGAP28-201ENST00000262227 KCNH8Q96L42 1107 aa9.74□□□□□ -0.85
ARHGAP28-201ENST00000262227 CUX2O14529 1486 aa9.74□□□□□ -0.85
ARHGAP28-201ENST00000262227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.73□□□□□ -0.85
ARHGAP28-201ENST00000262227 CARMIL1Q5VZK9 1371 aa9.72□□□□□ -0.85
ARHGAP28-201ENST00000262227 CLSPNQ9HAW4 1339 aa9.72□□□□□ -0.85
ARHGAP28-201ENST00000262227 CNGB1Q14028 1251 aaPredicted RBP9.72□□□□□ -0.85
ARHGAP28-201ENST00000262227 CFDP1Q9UEE9 299 aaPredicted RBP9.72□□□□□ -0.85
ARHGAP28-201ENST00000262227 KANK1Q14678 1352 aa9.72□□□□□ -0.85
ARHGAP28-201ENST00000262227 SOGA1O94964 1423 aa9.71□□□□□ -0.85
ARHGAP28-201ENST00000262227 TNIKQ9UKE5 1360 aa9.71□□□□□ -0.85
ARHGAP28-201ENST00000262227 PLPPR3Q6T4P5 718 aa9.71□□□□□ -0.86
ARHGAP28-201ENST00000262227 SLC24A1O60721 1099 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 244 ms