RNA–Protein interactions for RNA: ENST00000590044.1

ELOCP28-201, Transcript of elongin C pseudogene 28, humanhuman

BASIC

Gene ELOCP28, Length 317 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ELOCP28-201ENST00000590044 AEBP2Q6ZN18 517 aaPredicted RBP26.43■■□□□ 1.82
ELOCP28-201ENST00000590044 CHIC1Q5VXU3 224 aa25.04■■□□□ 1.6
ELOCP28-201ENST00000590044 SENP3Q9H4L4 574 aaPredicted RBP22.41■■□□□ 1.18
ELOCP28-201ENST00000590044 PHF23Q9BUL5 403 aaPredicted RBP22.2■■□□□ 1.14
ELOCP28-201ENST00000590044 FOXD1Q16676 465 aa20.97■□□□□ 0.95
ELOCP28-201ENST00000590044 PLPPR3Q6T4P5 718 aa19.99■□□□□ 0.79
ELOCP28-201ENST00000590044 PPP6R1Q9UPN7 881 aa19.68■□□□□ 0.74
ELOCP28-201ENST00000590044 ADRA2BP18089 450 aa19.62■□□□□ 0.73
ELOCP28-201ENST00000590044 PIAS4Q8N2W9 510 aaPredicted RBP19.6■□□□□ 0.73
ELOCP28-201ENST00000590044 MSH5O43196 834 aa19.51■□□□□ 0.71
ELOCP28-201ENST00000590044 POTEDQ86YR6 584 aa19.11■□□□□ 0.65
ELOCP28-201ENST00000590044 MAPK8IP2Q13387 824 aaPredicted RBP18.04■□□□□ 0.48
ELOCP28-201ENST00000590044 DMRT2Q9Y5R5 561 aa17.8■□□□□ 0.44
ELOCP28-201ENST00000590044 SCAF1Q9H7N4 1312 aaKnown RBP17.79■□□□□ 0.44
ELOCP28-201ENST00000590044 PPP4R3CPQ6ZMV5 832 aa17.57■□□□□ 0.4
ELOCP28-201ENST00000590044 CNKSR2Q8WXI2 1034 aa17.19■□□□□ 0.34
ELOCP28-201ENST00000590044 DCAF8L1A6NGE4 600 aa17.15■□□□□ 0.34
ELOCP28-201ENST00000590044 HOXD11P31277 338 aaPredicted RBP17.15■□□□□ 0.34
ELOCP28-201ENST00000590044 RNF216Q9NWF9 866 aaPredicted RBP17.01■□□□□ 0.31
ELOCP28-201ENST00000590044 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
ELOCP28-201ENST00000590044 CACNB1Q02641 598 aaPredicted RBP16.81■□□□□ 0.28
ELOCP28-201ENST00000590044 RNF39Q9H2S5 420 aa16.7■□□□□ 0.26
ELOCP28-201ENST00000590044 NPM3O75607 178 aaKnown RBP16.67■□□□□ 0.26
ELOCP28-201ENST00000590044 DNAJC5BQ9UF47 199 aa16.44■□□□□ 0.22
ELOCP28-201ENST00000590044 KCNA4P22459 653 aa16.42■□□□□ 0.22
ELOCP28-201ENST00000590044 C1QBPQ07021 282 aaKnown RBP16.41■□□□□ 0.22
ELOCP28-201ENST00000590044 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.37■□□□□ 0.21
ELOCP28-201ENST00000590044 U3KPZ7 1027 aaPredicted RBP16.06■□□□□ 0.16
ELOCP28-201ENST00000590044 SLC4A2P04920 1241 aa15.94■□□□□ 0.14
ELOCP28-201ENST00000590044 SPINK5Q9NQ38 1064 aaPredicted RBP15.86■□□□□ 0.13
ELOCP28-201ENST00000590044 CAPN15O75808 1086 aa15.79■□□□□ 0.12
ELOCP28-201ENST00000590044 DSG3P32926 999 aa15.68■□□□□ 0.1
ELOCP28-201ENST00000590044 TRHP20396 242 aaPredicted RBP15.57■□□□□ 0.08
ELOCP28-201ENST00000590044 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.48■□□□□ 0.07
ELOCP28-201ENST00000590044 ABCB7O75027 752 aa15.48■□□□□ 0.07
ELOCP28-201ENST00000590044 HNRNPUL2Q1KMD3 747 aaKnown RBP15.48■□□□□ 0.07
ELOCP28-201ENST00000590044 APLP2Q06481 763 aa15.45■□□□□ 0.06
ELOCP28-201ENST00000590044 SLC4A1APQ9BWU0 796 aaKnown RBP15.45■□□□□ 0.06
ELOCP28-201ENST00000590044 ZNF219Q9P2Y4 722 aaPredicted RBP15.43■□□□□ 0.06
ELOCP28-201ENST00000590044 SAMD1Q6SPF0 538 aaPredicted RBP15.42■□□□□ 0.06
ELOCP28-201ENST00000590044 MYCNP04198 464 aaPredicted RBP15.36■□□□□ 0.05
ELOCP28-201ENST00000590044 FOXD4L1Q9NU39 408 aa15.24■□□□□ 0.03
ELOCP28-201ENST00000590044 POLA2Q14181 598 aa15.13■□□□□ 0.01
ELOCP28-201ENST00000590044 ATF5Q9Y2D1 282 aaPredicted RBP15.13■□□□□ 0.01
ELOCP28-201ENST00000590044 ZBTB22O15209 634 aa15.12■□□□□ 0.01
ELOCP28-201ENST00000590044 POTEHQ6S545 545 aa14.96□□□□□ -0.01
ELOCP28-201ENST00000590044 RBM42Q9BTD8 480 aaKnown RBP14.86□□□□□ -0.03
ELOCP28-201ENST00000590044 ATXN8OSP0DMR3 200 aa14.69□□□□□ -0.06
ELOCP28-201ENST00000590044 ZBTB12Q9Y330 459 aaPredicted RBP14.69□□□□□ -0.06
ELOCP28-201ENST00000590044 OSCARQ8IYS5 282 aa14.66□□□□□ -0.06
ELOCP28-201ENST00000590044 CHRDL2Q6WN34 429 aa14.6□□□□□ -0.07
ELOCP28-201ENST00000590044 AKT1S1Q96B36 256 aa14.56□□□□□ -0.08
ELOCP28-201ENST00000590044 REM2Q8IYK8 340 aaPredicted RBP14.47□□□□□ -0.09
ELOCP28-201ENST00000590044 CSRNP3Q8WYN3 585 aa14.42□□□□□ -0.1
ELOCP28-201ENST00000590044 FBLN2P98095 1184 aa14.4□□□□□ -0.1
ELOCP28-201ENST00000590044 MKRN4PQ13434 485 aaPredicted RBP14.4□□□□□ -0.1
ELOCP28-201ENST00000590044 PITPNM1O00562 1244 aa14.34□□□□□ -0.11
ELOCP28-201ENST00000590044 SPDYE2BA6NHP3 402 aa14.3□□□□□ -0.12
ELOCP28-201ENST00000590044 SPDYE6P0CI01 402 aa14.3□□□□□ -0.12
ELOCP28-201ENST00000590044 SPDYE2Q495Y8 402 aa14.3□□□□□ -0.12
ELOCP28-201ENST00000590044 PIP4P2Q8N4L2 257 aa14.29□□□□□ -0.12
ELOCP28-201ENST00000590044 EHMT2Q96KQ7 1210 aa14.28□□□□□ -0.12
ELOCP28-201ENST00000590044 ZNF692Q9BU19 519 aaPredicted RBP14.19□□□□□ -0.14
ELOCP28-201ENST00000590044 FXR2P51116 673 aaKnown RBP eCLIP14.17□□□□□ -0.14
ELOCP28-201ENST00000590044 SSUH2Q9Y2M2 353 aa14.13□□□□□ -0.15
ELOCP28-201ENST00000590044 CLEC11AQ9Y240 323 aa14.12□□□□□ -0.15
ELOCP28-201ENST00000590044 SPDYE1Q8NFV5 336 aaPredicted RBP14.05□□□□□ -0.16
ELOCP28-201ENST00000590044 HAX1O00165 279 aa14.02□□□□□ -0.17
ELOCP28-201ENST00000590044 SP7Q8TDD2 431 aaPredicted RBP14.02□□□□□ -0.17
ELOCP28-201ENST00000590044 PABPN1Q86U42 306 aaKnown RBP eCLIP13.99□□□□□ -0.17
ELOCP28-201ENST00000590044 PRKAR2AP13861 404 aaKnown RBP13.97□□□□□ -0.17
ELOCP28-201ENST00000590044 EVX2Q03828 476 aa13.92□□□□□ -0.18
ELOCP28-201ENST00000590044 CHADLQ6NUI6 762 aa13.88□□□□□ -0.19
ELOCP28-201ENST00000590044 PRR29P0C7W0 189 aa13.84□□□□□ -0.19
ELOCP28-201ENST00000590044 C19orf67A6NJJ6 358 aa13.72□□□□□ -0.21
ELOCP28-201ENST00000590044 SPDYE4A6NLX3 237 aa13.69□□□□□ -0.22
ELOCP28-201ENST00000590044 FARP1Q9Y4F1 1045 aaPredicted RBP13.59□□□□□ -0.23
ELOCP28-201ENST00000590044 GABBR2O75899 941 aa13.54□□□□□ -0.24
ELOCP28-201ENST00000590044 CD44P16070 742 aaKnown RBP13.52□□□□□ -0.25
ELOCP28-201ENST00000590044 CREBZFQ9NS37 354 aa13.52□□□□□ -0.25
ELOCP28-201ENST00000590044 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
ELOCP28-201ENST00000590044 ZRANB1Q9UGI0 708 aa13.34□□□□□ -0.27
ELOCP28-201ENST00000590044 PROM2Q8N271 834 aa13.32□□□□□ -0.28
ELOCP28-201ENST00000590044 POTEIP0CG38 1075 aa13.3□□□□□ -0.28
ELOCP28-201ENST00000590044 MNX1P50219 401 aaPredicted RBP13.29□□□□□ -0.28
ELOCP28-201ENST00000590044 ZNF579Q8NAF0 562 aaKnown RBP13.27□□□□□ -0.29
ELOCP28-201ENST00000590044 NPM1P06748 294 aaKnown RBP eCLIP13.2□□□□□ -0.3
ELOCP28-201ENST00000590044 GALR2O43603 387 aaPredicted RBP13.19□□□□□ -0.3
ELOCP28-201ENST00000590044 PHF12Q96QT6 1004 aa13.19□□□□□ -0.3
ELOCP28-201ENST00000590044 CLCN6P51797 869 aa13.17□□□□□ -0.3
ELOCP28-201ENST00000590044 LHX8Q68G74 356 aa13.17□□□□□ -0.3
ELOCP28-201ENST00000590044 PAK3O75914 559 aaPredicted RBP13.16□□□□□ -0.3
ELOCP28-201ENST00000590044 DCBLD2Q96PD2 775 aa13.15□□□□□ -0.3
ELOCP28-201ENST00000590044 FKBP8Q14318 412 aa13.08□□□□□ -0.32
ELOCP28-201ENST00000590044 MIER1Q8N108 512 aa13.07□□□□□ -0.32
ELOCP28-201ENST00000590044 TSPYL2Q9H2G4 693 aaPredicted RBP13.07□□□□□ -0.32
ELOCP28-201ENST00000590044 MS4A3Q96HJ5 214 aa13□□□□□ -0.33
ELOCP28-201ENST00000590044 ABCC9O60706 1549 aa12.98□□□□□ -0.33
ELOCP28-201ENST00000590044 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
ELOCP28-201ENST00000590044 PLCD3Q8N3E9 789 aa12.96□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms