Protein–RNA interactions for Protein: Q9Y5G7

PCDHGA6, Protocadherin gamma-A6, humanhuman

Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA6Q9Y5G7 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 HSD11B1L-219ENST00000581893 1540 ntTSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19■□□□□ 0.63
PCDHGA6Q9Y5G7 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 NXN-201ENST00000336868 3036 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 KRASP1-201ENST00000407852 552 ntBASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 RARRES2P10-201ENST00000564312 460 ntBASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 REXO1L12P-201ENST00000622156 912 ntBASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
PCDHGA6Q9Y5G7 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 MAMSTR-203ENST00000594582 1693 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 KCNK17-202ENST00000453413 1706 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.98■□□□□ 0.63
PCDHGA6Q9Y5G7 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 AC023632.3-201ENST00000521633 145 ntBASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 REXO2-216ENST00000544196 452 ntTSL 3 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 SDHA-220ENST00000617470 1952 ntTSL 5 BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
PCDHGA6Q9Y5G7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 KLHDC4-204ENST00000353170 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 PRKY-204ENST00000533551 1019 ntBASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 BX088651.1-201ENST00000540551 451 ntBASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 NRN1-203ENST00000616243 1556 ntAPPRIS P1 TSL 4 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 AC099778.1-201ENST00000568593 1911 ntBASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.96■□□□□ 0.63
PCDHGA6Q9Y5G7 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA6Q9Y5G7 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA6Q9Y5G7 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
PCDHGA6Q9Y5G7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
PCDHGA6Q9Y5G7 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms