Protein–RNA interactions for Protein: Q9Y3Q4

HCN4, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN4Q9Y3Q4 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
HCN4Q9Y3Q4 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC20.24■□□□□ 0.83
HCN4Q9Y3Q4 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 AC026271.3-201ENST00000571884 352 ntBASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 AC141257.4-201ENST00000634557 245 ntBASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 AC136944.6-201ENST00000634818 245 ntBASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 LCK-214ENST00000619559 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
HCN4Q9Y3Q4 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 PNN-205ENST00000556530 601 ntTSL 2 BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
HCN4Q9Y3Q4 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 NELFE-202ENST00000375429 1584 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 AC003102.1-202ENST00000563394 1796 ntBASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 CCR12P-201ENST00000446203 998 ntBASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.21■□□□□ 0.83
HCN4Q9Y3Q4 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.83
HCN4Q9Y3Q4 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 IFI6-202ENST00000361157 841 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 MESTP1-201ENST00000404287 994 ntBASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 MIR1233-2-201ENST00000408138 82 ntBASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 MIR1233-1-201ENST00000408722 82 ntBASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 CYGB-204ENST00000589342 815 ntTSL 3 BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 AC133065.2-201ENST00000573379 2147 ntTSL 2 BASIC20.2■□□□□ 0.82
HCN4Q9Y3Q4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 HIST1H2APS4-201ENST00000362070 348 ntBASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 HMGN1P19-201ENST00000436976 333 ntBASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 AC140113.3-201ENST00000605663 199 ntBASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.19■□□□□ 0.82
HCN4Q9Y3Q4 PLPP7-202ENST00000372264 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
HCN4Q9Y3Q4 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
HCN4Q9Y3Q4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
HCN4Q9Y3Q4 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HCN4Q9Y3Q4 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
HCN4Q9Y3Q4 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC20.18■□□□□ 0.82
HCN4Q9Y3Q4 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 23.2 ms