Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 UBE2DNL-204ENST00000602536 740 ntBASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 CD55-203ENST00000367063 1691 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
UBE2D4Q9Y2X8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.22
UBE2D4Q9Y2X8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC13.71□□□□□ -0.22
UBE2D4Q9Y2X8 GPRC5C-204ENST00000392629 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBE2D4Q9Y2X8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBE2D4Q9Y2X8 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
UBE2D4Q9Y2X8 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 KRT19P1-201ENST00000405746 1186 ntBASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 NAT16-202ENST00000443096 1286 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 YBX1P1-201ENST00000445822 960 ntBASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 KRT18P14-201ENST00000534205 1250 ntBASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 AL591742.1-201ENST00000604433 565 ntBASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 MRPL40-201ENST00000333130 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
UBE2D4Q9Y2X8 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 AL138781.2-201ENST00000617896 1843 ntBASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 MAST1-208ENST00000591495 1496 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 MYCNOS-205ENST00000641950 531 ntBASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 NEFHP1-201ENST00000412845 2629 ntBASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
UBE2D4Q9Y2X8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
UBE2D4Q9Y2X8 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms