Protein–RNA interactions for Protein: Q9UQ90

SPG7, Paraplegin, humanhuman

Predictions only

Length 795 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7Q9UQ90 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
SPG7Q9UQ90 LAYN-202ENST00000375615 1836 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 LGALS8-AS1-201ENST00000487567 1457 ntBASIC25.81■■□□□ 1.72
SPG7Q9UQ90 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 FDX2-206ENST00000492239 773 ntTSL 2 BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 NTF6B-201ENST00000591913 560 ntBASIC25.81■■□□□ 1.72
SPG7Q9UQ90 CCDC124-203ENST00000597436 1055 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 CACNA1H-201ENST00000348261 8208 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 WDR4-202ENST00000398208 2122 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
SPG7Q9UQ90 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 AC011298.2-201ENST00000617989 482 ntBASIC25.8■■□□□ 1.72
SPG7Q9UQ90 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC25.8■■□□□ 1.72
SPG7Q9UQ90 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC25.79■■□□□ 1.72
SPG7Q9UQ90 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC25.79■■□□□ 1.72
SPG7Q9UQ90 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC25.79■■□□□ 1.72
SPG7Q9UQ90 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
SPG7Q9UQ90 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC25.79■■□□□ 1.72
SPG7Q9UQ90 AC006011.2-201ENST00000621313 1158 ntBASIC25.79■■□□□ 1.72
SPG7Q9UQ90 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC25.79■■□□□ 1.72
SPG7Q9UQ90 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
SPG7Q9UQ90 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SPG7Q9UQ90 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
SPG7Q9UQ90 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 INGX-201ENST00000359239 846 ntBASIC25.78■■□□□ 1.72
SPG7Q9UQ90 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 AC004951.3-201ENST00000418645 1148 ntBASIC25.78■■□□□ 1.72
SPG7Q9UQ90 PTPA-216ENST00000432651 857 ntTSL 2 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 AC008040.2-201ENST00000461049 708 ntBASIC25.78■■□□□ 1.72
SPG7Q9UQ90 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 FAM87A-204ENST00000613235 858 ntBASIC25.78■■□□□ 1.72
SPG7Q9UQ90 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC25.78■■□□□ 1.72
SPG7Q9UQ90 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC25.77■■□□□ 1.72
SPG7Q9UQ90 NAP1L4-212ENST00000526115 1941 ntTSL 2 BASIC25.77■■□□□ 1.72
SPG7Q9UQ90 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SPG7Q9UQ90 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SPG7Q9UQ90 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC25.77■■□□□ 1.72
SPG7Q9UQ90 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC25.77■■□□□ 1.72
SPG7Q9UQ90 CYGB-204ENST00000589342 815 ntTSL 3 BASIC25.77■■□□□ 1.72
SPG7Q9UQ90 SMG8-203ENST00000578922 2178 ntBASIC25.77■■□□□ 1.72
SPG7Q9UQ90 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
SPG7Q9UQ90 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC25.77■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms