Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
NKX1-2Q9UD57 AC009237.3-201ENST00000393279 1427 ntBASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 TNRC18P3-201ENST00000441896 2691 ntBASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 UQCR11-203ENST00000591899 1324 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
NKX1-2Q9UD57 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
NKX1-2Q9UD57 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 FXN-202ENST00000396364 980 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 C16orf86-201ENST00000403458 1267 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 NTF6A-201ENST00000591175 560 ntBASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
NKX1-2Q9UD57 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 SLC47A1P1-202ENST00000449666 945 ntBASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 FAM66A-201ENST00000525829 921 ntTSL 2 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
NKX1-2Q9UD57 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms