Protein–RNA interactions for Protein: Q9NP62

GCM1, Chorion-specific transcription factor GCMa, humanhuman

Predictions only

Length 436 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GCM1Q9NP62 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
GCM1Q9NP62 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC16.83■□□□□ 0.28
GCM1Q9NP62 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
GCM1Q9NP62 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 AL391422.3-201ENST00000603791 2761 ntBASIC16.82■□□□□ 0.28
GCM1Q9NP62 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 ARRB2-216ENST00000574954 1348 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 KRT18P29-201ENST00000397031 1267 ntBASIC16.82■□□□□ 0.28
GCM1Q9NP62 AC128676.1-201ENST00000454392 318 ntBASIC16.82■□□□□ 0.28
GCM1Q9NP62 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 AC073648.6-201ENST00000641589 218 ntBASIC16.82■□□□□ 0.28
GCM1Q9NP62 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 AC124283.5-201ENST00000624661 1809 ntBASIC16.82■□□□□ 0.28
GCM1Q9NP62 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
GCM1Q9NP62 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
GCM1Q9NP62 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 MAX-217ENST00000557277 728 ntTSL 3 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 IRX5-204ENST00000560154 879 ntTSL 5 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 AC069544.1-201ENST00000609399 999 ntBASIC16.81■□□□□ 0.28
GCM1Q9NP62 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 SPHK1-203ENST00000545180 2238 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
GCM1Q9NP62 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
GCM1Q9NP62 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 THEM4-205ENST00000489410 643 ntTSL 2 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.8■□□□□ 0.28
GCM1Q9NP62 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
GCM1Q9NP62 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC16.79■□□□□ 0.28
GCM1Q9NP62 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC16.79■□□□□ 0.28
GCM1Q9NP62 RNF224-201ENST00000445101 1798 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
GCM1Q9NP62 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
GCM1Q9NP62 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC16.79■□□□□ 0.28
GCM1Q9NP62 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
GCM1Q9NP62 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC16.79■□□□□ 0.28
GCM1Q9NP62 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms