Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 AL135905.2-201ENST00000584934 1404 ntBASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 STX6-204ENST00000542060 4809 ntTSL 2 BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
SSBP3Q9BWW4 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 SUMO3-201ENST00000332859 1807 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 ACHE-207ENST00000428317 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
SSBP3Q9BWW4 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 AC012618.2-201ENST00000428058 849 ntBASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 KRT16P5-201ENST00000455284 522 ntBASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 AP001412.1-201ENST00000608405 714 ntBASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
SSBP3Q9BWW4 STK25-204ENST00000405585 1643 ntTSL 2 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 XBP1-203ENST00000403532 1824 ntAPPRIS ALT1 TSL 3 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 IAH1-215ENST00000497473 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 ARF3-208ENST00000541959 807 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 RARRES2P10-201ENST00000564312 460 ntBASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 AC116351.2-201ENST00000606540 1585 ntBASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 PHGDH-210ENST00000641115 1638 ntBASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 AVPR2-202ENST00000358927 1763 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 LINC01521-201ENST00000504184 1943 ntBASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 AC073314.1-201ENST00000568729 2216 ntBASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
SSBP3Q9BWW4 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 RPS2P55-201ENST00000397318 883 ntBASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 AC107956.1-201ENST00000494359 873 ntBASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 Z99916.2-201ENST00000604037 246 ntBASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
SSBP3Q9BWW4 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 40 ms