Protein–RNA interactions for Protein: Q9BQE3

TUBA1C, Tubulin alpha-1C chain, humanhuman

Predictions only

Length 449 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1CQ9BQE3 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1CQ9BQE3 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.57■□□□□ 0.56
TUBA1CQ9BQE3 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1CQ9BQE3 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
TUBA1CQ9BQE3 AC093484.2-201ENST00000580996 2166 ntBASIC18.57■□□□□ 0.56
TUBA1CQ9BQE3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.57■□□□□ 0.56
TUBA1CQ9BQE3 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 PRMT2-210ENST00000458387 1874 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 PPP1R14BP2-201ENST00000426284 444 ntBASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
TUBA1CQ9BQE3 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 TRIM4-202ENST00000354241 1942 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 CD99P1-205ENST00000527459 561 ntBASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 KRT18P6-201ENST00000555540 1265 ntBASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 BEAN1-AS1-201ENST00000564618 533 ntTSL 4 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 AC092118.2-201ENST00000613495 667 ntBASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 SLC35A3-218ENST00000639994 1114 ntTSL 5 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
TUBA1CQ9BQE3 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 Z82202.1-201ENST00000623446 1880 ntBASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 CELF2-211ENST00000632065 1952 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 COQ10A-201ENST00000308197 1652 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
TUBA1CQ9BQE3 AL138781.2-201ENST00000617896 1843 ntBASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 AC079598.2-202ENST00000546624 1451 ntBASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 FDXR-219ENST00000583917 1762 ntTSL 5 BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TUBA1CQ9BQE3 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms