Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK1Q99986 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
VRK1Q99986 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.34■□□□□ 0.37
VRK1Q99986 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC17.34■□□□□ 0.37
VRK1Q99986 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
VRK1Q99986 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.34■□□□□ 0.37
VRK1Q99986 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.34■□□□□ 0.37
VRK1Q99986 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC17.34■□□□□ 0.37
VRK1Q99986 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC17.34■□□□□ 0.37
VRK1Q99986 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
VRK1Q99986 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
VRK1Q99986 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.34■□□□□ 0.37
VRK1Q99986 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
VRK1Q99986 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC17.34■□□□□ 0.37
VRK1Q99986 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.37
VRK1Q99986 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC17.33■□□□□ 0.37
VRK1Q99986 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC17.33■□□□□ 0.37
VRK1Q99986 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
VRK1Q99986 FSCN2-202ENST00000417245 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
VRK1Q99986 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.33■□□□□ 0.37
VRK1Q99986 BORCS8-MEF2B-202ENST00000444486 1492 ntAPPRIS P2 TSL 2 BASIC17.33■□□□□ 0.37
VRK1Q99986 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
VRK1Q99986 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 TSTA3-201ENST00000425753 1362 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VRK1Q99986 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.33■□□□□ 0.36
VRK1Q99986 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC17.33■□□□□ 0.36
VRK1Q99986 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.33■□□□□ 0.36
VRK1Q99986 AC073648.6-201ENST00000641589 218 ntBASIC17.33■□□□□ 0.36
VRK1Q99986 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC17.33■□□□□ 0.36
VRK1Q99986 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.36
VRK1Q99986 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 AC011484.1-201ENST00000377652 1995 ntBASIC17.33■□□□□ 0.36
VRK1Q99986 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 C14orf79-207ENST00000550614 1912 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC17.33■□□□□ 0.36
VRK1Q99986 PRKRA-201ENST00000325748 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
VRK1Q99986 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
VRK1Q99986 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC17.32■□□□□ 0.36
VRK1Q99986 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.32■□□□□ 0.36
VRK1Q99986 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC17.32■□□□□ 0.36
VRK1Q99986 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
VRK1Q99986 ERF-202ENST00000440177 2032 ntTSL 2 BASIC17.32■□□□□ 0.36
VRK1Q99986 PCDHAC2-201ENST00000289269 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VRK1Q99986 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 KRT17P3-201ENST00000420566 1262 ntBASIC17.32■□□□□ 0.36
VRK1Q99986 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 UNC93B4-201ENST00000505679 747 ntBASIC17.32■□□□□ 0.36
VRK1Q99986 AC093827.2-201ENST00000512654 315 ntBASIC17.32■□□□□ 0.36
VRK1Q99986 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.32■□□□□ 0.36
VRK1Q99986 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 SOX15-203ENST00000570788 1093 ntBASIC17.32■□□□□ 0.36
VRK1Q99986 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC17.32■□□□□ 0.36
VRK1Q99986 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.32■□□□□ 0.36
VRK1Q99986 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.32■□□□□ 0.36
VRK1Q99986 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.32■□□□□ 0.36
VRK1Q99986 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
VRK1Q99986 AC098818.2-201ENST00000564925 2320 ntBASIC17.32■□□□□ 0.36
VRK1Q99986 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VRK1Q99986 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC17.32■□□□□ 0.36
VRK1Q99986 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
VRK1Q99986 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
VRK1Q99986 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
VRK1Q99986 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK1Q99986 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK1Q99986 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
VRK1Q99986 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
VRK1Q99986 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms