Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 SLC52A2-209ENST00000530047 1757 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 AC142086.2-201ENST00000569753 217 ntBASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 AC092368.3-202ENST00000574180 1591 ntBASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 HLA-B-256ENST00000639848 1089 ntBASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
PCDHB18PQ96TA0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 RNF40-201ENST00000324685 5634 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 RPS2P52-201ENST00000469610 820 ntBASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.9■□□□□ 0.94
PCDHB18PQ96TA0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB18PQ96TA0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.89■□□□□ 0.94
PCDHB18PQ96TA0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB18PQ96TA0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC20.89■□□□□ 0.94
PCDHB18PQ96TA0 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PCDHB18PQ96TA0 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 PPP1R14A-202ENST00000347262 637 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 AC069152.1-201ENST00000438030 544 ntBASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 PNMA6B-201ENST00000538162 1200 ntBASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.93
PCDHB18PQ96TA0 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 REXO2-208ENST00000539754 791 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 AC087289.5-201ENST00000586076 3175 ntBASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
PCDHB18PQ96TA0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
PCDHB18PQ96TA0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms