Protein–RNA interactions for Protein: Q96T58

SPEN, Msx2-interacting protein, humanhuman

Known RBP Predictions only

Length 3,664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPENQ96T58 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.87■□□□□ 0.45
SPENQ96T58 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 ACOT2-205ENST00000622407 1604 ntAPPRIS ALT1 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
SPENQ96T58 LINC00565-201ENST00000562710 2331 ntBASIC17.87■□□□□ 0.45
SPENQ96T58 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SPENQ96T58 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
SPENQ96T58 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC17.86■□□□□ 0.45
SPENQ96T58 KSR1P1-201ENST00000446298 240 ntBASIC17.86■□□□□ 0.45
SPENQ96T58 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPENQ96T58 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
SPENQ96T58 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPENQ96T58 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.86■□□□□ 0.45
SPENQ96T58 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC17.86■□□□□ 0.45
SPENQ96T58 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPENQ96T58 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPENQ96T58 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.86■□□□□ 0.45
SPENQ96T58 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
SPENQ96T58 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
SPENQ96T58 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.85■□□□□ 0.45
SPENQ96T58 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC17.85■□□□□ 0.45
SPENQ96T58 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.85■□□□□ 0.45
SPENQ96T58 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC17.85■□□□□ 0.45
SPENQ96T58 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC17.85■□□□□ 0.45
SPENQ96T58 AC007375.3-201ENST00000600936 2314 ntBASIC17.85■□□□□ 0.45
SPENQ96T58 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
SPENQ96T58 HYLS1-203ENST00000526028 1803 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SPENQ96T58 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SPENQ96T58 RABL2B-206ENST00000395598 2169 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPENQ96T58 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPENQ96T58 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SPENQ96T58 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC17.85■□□□□ 0.45
SPENQ96T58 HCG4P8-203ENST00000443049 980 ntBASIC17.85■□□□□ 0.45
SPENQ96T58 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.85■□□□□ 0.45
SPENQ96T58 ADRA1B-201ENST00000306675 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
SPENQ96T58 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.85■□□□□ 0.45
SPENQ96T58 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.85■□□□□ 0.45
SPENQ96T58 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
SPENQ96T58 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
SPENQ96T58 C1QL1P1-201ENST00000568105 661 ntBASIC17.85■□□□□ 0.45
SPENQ96T58 AC083849.1-201ENST00000615227 514 ntBASIC17.85■□□□□ 0.45
SPENQ96T58 AC130371.2-201ENST00000619443 611 ntBASIC17.85■□□□□ 0.45
SPENQ96T58 SMG8-203ENST00000578922 2178 ntBASIC17.85■□□□□ 0.45
SPENQ96T58 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.85■□□□□ 0.45
SPENQ96T58 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
SPENQ96T58 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.84■□□□□ 0.45
SPENQ96T58 HOXB-AS3-203ENST00000465846 434 ntTSL 3 BASIC17.84■□□□□ 0.45
SPENQ96T58 AP002982.1-201ENST00000492365 877 ntBASIC17.84■□□□□ 0.45
SPENQ96T58 ULK4P3-205ENST00000568486 1158 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 AC092338.2-201ENST00000568827 1415 ntBASIC17.84■□□□□ 0.45
SPENQ96T58 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC17.84■□□□□ 0.45
SPENQ96T58 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.84■□□□□ 0.45
SPENQ96T58 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC17.84■□□□□ 0.45
SPENQ96T58 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 KRT8P20-201ENST00000423953 1409 ntBASIC17.84■□□□□ 0.45
SPENQ96T58 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.84■□□□□ 0.45
SPENQ96T58 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
SPENQ96T58 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC17.83■□□□□ 0.45
SPENQ96T58 AC244015.2-201ENST00000616358 1861 ntBASIC17.83■□□□□ 0.45
SPENQ96T58 FP700111.2-201ENST00000619190 1892 ntBASIC17.83■□□□□ 0.45
SPENQ96T58 AL390719.1-204ENST00000412397 1219 ntBASIC17.83■□□□□ 0.45
SPENQ96T58 AC097488.1-201ENST00000507834 756 ntBASIC17.83■□□□□ 0.45
SPENQ96T58 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.83■□□□□ 0.45
SPENQ96T58 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SPENQ96T58 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.83■□□□□ 0.44
SPENQ96T58 DALRD3-202ENST00000341949 1739 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPENQ96T58 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.83■□□□□ 0.44
SPENQ96T58 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPENQ96T58 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC17.83■□□□□ 0.44
SPENQ96T58 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC17.83■□□□□ 0.44
SPENQ96T58 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
SPENQ96T58 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
SPENQ96T58 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPENQ96T58 NSUN5-204ENST00000438747 1663 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPENQ96T58 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPENQ96T58 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SPENQ96T58 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.83■□□□□ 0.44
SPENQ96T58 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPENQ96T58 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SPENQ96T58 STAC-204ENST00000457375 1366 ntTSL 2 BASIC17.82■□□□□ 0.44
SPENQ96T58 CLN6-221ENST00000637494 765 ntTSL 5 BASIC17.82■□□□□ 0.44
SPENQ96T58 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPENQ96T58 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPENQ96T58 SNX3-201ENST00000230085 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPENQ96T58 CALM2-201ENST00000272298 1302 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPENQ96T58 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC17.82■□□□□ 0.44
SPENQ96T58 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SPENQ96T58 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
SPENQ96T58 MIR2861-201ENST00000636310 90 ntBASIC17.82■□□□□ 0.44
SPENQ96T58 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SPENQ96T58 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms