Protein–RNA interactions for Protein: Q96N23

CFAP54, Cilia- and flagella-associated protein 54, humanhuman

Predictions only

Length 3,096 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP54Q96N23 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC19.42■□□□□ 0.7
CFAP54Q96N23 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP54Q96N23 AL136038.3-201ENST00000561909 1096 ntBASIC19.42■□□□□ 0.7
CFAP54Q96N23 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP54Q96N23 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC19.42■□□□□ 0.7
CFAP54Q96N23 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP54Q96N23 C21orf2-202ENST00000339818 2233 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP54Q96N23 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP54Q96N23 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP54Q96N23 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP54Q96N23 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC19.42■□□□□ 0.7
CFAP54Q96N23 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC19.42■□□□□ 0.7
CFAP54Q96N23 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC19.42■□□□□ 0.7
CFAP54Q96N23 AL512604.3-201ENST00000569583 964 ntBASIC19.42■□□□□ 0.7
CFAP54Q96N23 AL023803.3-201ENST00000615559 522 ntBASIC19.42■□□□□ 0.7
CFAP54Q96N23 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP54Q96N23 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CFAP54Q96N23 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.42■□□□□ 0.7
CFAP54Q96N23 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP54Q96N23 KRT18P38-201ENST00000449496 1282 ntBASIC19.41■□□□□ 0.7
CFAP54Q96N23 SNX5-210ENST00000481323 562 ntTSL 3 BASIC19.41■□□□□ 0.7
CFAP54Q96N23 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP54Q96N23 CALY-201ENST00000252939 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP54Q96N23 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP54Q96N23 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP54Q96N23 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP54Q96N23 HIST1H2APS4-201ENST00000362070 348 ntBASIC19.41■□□□□ 0.7
CFAP54Q96N23 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC19.41■□□□□ 0.7
CFAP54Q96N23 RNA5SP419-201ENST00000515908 135 ntBASIC19.41■□□□□ 0.7
CFAP54Q96N23 BX640515.1-201ENST00000617215 977 ntBASIC19.41■□□□□ 0.7
CFAP54Q96N23 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC19.41■□□□□ 0.7
CFAP54Q96N23 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP54Q96N23 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CFAP54Q96N23 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.41■□□□□ 0.7
CFAP54Q96N23 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CFAP54Q96N23 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.41■□□□□ 0.7
CFAP54Q96N23 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP54Q96N23 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP54Q96N23 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP54Q96N23 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 CCDC38-201ENST00000344280 2277 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP54Q96N23 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP54Q96N23 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 RNH1-222ENST00000533410 1829 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 MIR1233-2-201ENST00000408138 82 ntBASIC19.4■□□□□ 0.7
CFAP54Q96N23 MIR1233-1-201ENST00000408722 82 ntBASIC19.4■□□□□ 0.7
CFAP54Q96N23 AC079781.3-201ENST00000449110 356 ntBASIC19.4■□□□□ 0.7
CFAP54Q96N23 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP54Q96N23 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP54Q96N23 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CFAP54Q96N23 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.4■□□□□ 0.7
CFAP54Q96N23 AC141257.4-201ENST00000634557 245 ntBASIC19.4■□□□□ 0.7
CFAP54Q96N23 AC136944.6-201ENST00000634818 245 ntBASIC19.4■□□□□ 0.7
CFAP54Q96N23 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CFAP54Q96N23 HLA-A-201ENST00000376802 1334 ntBASIC19.39■□□□□ 0.7
CFAP54Q96N23 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CFAP54Q96N23 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CFAP54Q96N23 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP54Q96N23 AC092329.2-201ENST00000598402 547 ntBASIC19.39■□□□□ 0.69
CFAP54Q96N23 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP54Q96N23 PLSCR3-201ENST00000324822 1689 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP54Q96N23 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP54Q96N23 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC19.39■□□□□ 0.69
CFAP54Q96N23 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC19.39■□□□□ 0.69
CFAP54Q96N23 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CFAP54Q96N23 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP54Q96N23 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP54Q96N23 SNX21-212ENST00000491381 1607 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP54Q96N23 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CFAP54Q96N23 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 TSPY12P-201ENST00000421279 868 ntBASIC19.38■□□□□ 0.69
CFAP54Q96N23 COX10-202ENST00000429152 875 ntTSL 2 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 AL139424.1-201ENST00000607572 797 ntBASIC19.38■□□□□ 0.69
CFAP54Q96N23 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 AC116562.4-202ENST00000641738 218 ntBASIC19.38■□□□□ 0.69
CFAP54Q96N23 AC096733.2-201ENST00000609937 1394 ntBASIC19.38■□□□□ 0.69
CFAP54Q96N23 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 PPIH-202ENST00000372549 327 ntTSL 3 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CFAP54Q96N23 KRT8P8-201ENST00000434750 1448 ntBASIC19.38■□□□□ 0.69
CFAP54Q96N23 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.38■□□□□ 0.69
CFAP54Q96N23 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms