Protein–RNA interactions for Protein: Q96MD7

C9orf85, Uncharacterized protein C9orf85, humanhuman

Predictions only

Length 179 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85Q96MD7 NXN-202ENST00000537628 1340 ntTSL 3 BASIC14.28□□□□□ -0.12
C9orf85Q96MD7 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC14.28□□□□□ -0.12
C9orf85Q96MD7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC14.28□□□□□ -0.12
C9orf85Q96MD7 MDK-213ENST00000617138 635 ntTSL 2 BASIC14.28□□□□□ -0.12
C9orf85Q96MD7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
C9orf85Q96MD7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC14.28□□□□□ -0.12
C9orf85Q96MD7 STX6-204ENST00000542060 4809 ntTSL 2 BASIC14.28□□□□□ -0.12
C9orf85Q96MD7 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
C9orf85Q96MD7 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
C9orf85Q96MD7 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 ANAPC11-208ENST00000572851 686 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 KCNMA1-224ENST00000618048 1269 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
C9orf85Q96MD7 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 TSPAN3-207ENST00000559494 1326 ntTSL 5 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 METTL26-203ENST00000397664 604 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 AC026271.2-201ENST00000428091 497 ntBASIC14.26□□□□□ -0.13
C9orf85Q96MD7 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
C9orf85Q96MD7 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 TOM1L2-210ENST00000542206 1320 ntTSL 2 BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
C9orf85Q96MD7 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms