Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 AC020907.5-201ENST00000624372 1936 ntBASIC16.57■□□□□ 0.24
TIMD4Q96H15 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 F2R-202ENST00000505600 442 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 MIR4785-201ENST00000585005 73 ntBASIC16.57■□□□□ 0.24
TIMD4Q96H15 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 BCL2-203ENST00000589955 5011 ntBASIC16.57■□□□□ 0.24
TIMD4Q96H15 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TIMD4Q96H15 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.57■□□□□ 0.24
TIMD4Q96H15 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC16.56■□□□□ 0.24
TIMD4Q96H15 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMD4Q96H15 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMD4Q96H15 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
TIMD4Q96H15 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMD4Q96H15 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMD4Q96H15 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
TIMD4Q96H15 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMD4Q96H15 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMD4Q96H15 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TIMD4Q96H15 RPS15-203ENST00000586096 570 ntTSL 2 BASIC16.56■□□□□ 0.24
TIMD4Q96H15 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TIMD4Q96H15 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
TIMD4Q96H15 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 AC018553.1-201ENST00000616682 1458 ntBASIC16.55■□□□□ 0.24
TIMD4Q96H15 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 YBX1P10-201ENST00000444752 975 ntBASIC16.55■□□□□ 0.24
TIMD4Q96H15 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 DHDH-203ENST00000522614 776 ntTSL 5 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC16.55■□□□□ 0.24
TIMD4Q96H15 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TIMD4Q96H15 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 ME3-202ENST00000393324 2240 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 TAF6L-201ENST00000294168 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
TIMD4Q96H15 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.54■□□□□ 0.24
TIMD4Q96H15 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 CD37-204ENST00000535669 1674 ntTSL 2 BASIC16.54■□□□□ 0.24
TIMD4Q96H15 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 AF186192.3-201ENST00000583427 947 ntBASIC16.54■□□□□ 0.24
TIMD4Q96H15 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC16.54■□□□□ 0.24
TIMD4Q96H15 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC16.54■□□□□ 0.24
TIMD4Q96H15 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
TIMD4Q96H15 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC16.54■□□□□ 0.24
TIMD4Q96H15 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TIMD4Q96H15 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
TIMD4Q96H15 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 AL137060.1-201ENST00000618151 2648 ntBASIC16.53■□□□□ 0.24
TIMD4Q96H15 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
TIMD4Q96H15 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC16.53■□□□□ 0.24
TIMD4Q96H15 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms