Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
DDX1Q92499 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX1Q92499 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX1Q92499 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
DDX1Q92499 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX1Q92499 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC21.02■□□□□ 0.96
DDX1Q92499 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC21.02■□□□□ 0.96
DDX1Q92499 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
DDX1Q92499 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC21.02■□□□□ 0.95
DDX1Q92499 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
DDX1Q92499 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC21.02■□□□□ 0.95
DDX1Q92499 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.95
DDX1Q92499 AC124283.5-201ENST00000624661 1809 ntBASIC21.01■□□□□ 0.95
DDX1Q92499 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
DDX1Q92499 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX1Q92499 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX1Q92499 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC21.01■□□□□ 0.95
DDX1Q92499 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC21.01■□□□□ 0.95
DDX1Q92499 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX1Q92499 AC060766.5-201ENST00000590539 871 ntBASIC21.01■□□□□ 0.95
DDX1Q92499 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 TFP1-202ENST00000475455 1573 ntBASIC21.01■□□□□ 0.95
DDX1Q92499 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC21.01■□□□□ 0.95
DDX1Q92499 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC21.01■□□□□ 0.95
DDX1Q92499 AC092368.3-202ENST00000574180 1591 ntBASIC21.01■□□□□ 0.95
DDX1Q92499 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
DDX1Q92499 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX1Q92499 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
DDX1Q92499 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX1Q92499 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
DDX1Q92499 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX1Q92499 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC21■□□□□ 0.95
DDX1Q92499 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21■□□□□ 0.95
DDX1Q92499 AC007952.6-201ENST00000573168 2673 ntBASIC21■□□□□ 0.95
DDX1Q92499 AC003957.1-201ENST00000625108 2673 ntBASIC21■□□□□ 0.95
DDX1Q92499 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC21■□□□□ 0.95
DDX1Q92499 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX1Q92499 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC21■□□□□ 0.95
DDX1Q92499 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21■□□□□ 0.95
DDX1Q92499 ECEL1P3-201ENST00000427961 737 ntBASIC21■□□□□ 0.95
DDX1Q92499 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC21■□□□□ 0.95
DDX1Q92499 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21■□□□□ 0.95
DDX1Q92499 PNMA6B-201ENST00000538162 1200 ntBASIC21■□□□□ 0.95
DDX1Q92499 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC21■□□□□ 0.95
DDX1Q92499 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC21■□□□□ 0.95
DDX1Q92499 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC21■□□□□ 0.95
DDX1Q92499 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21■□□□□ 0.95
DDX1Q92499 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DDX1Q92499 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX1Q92499 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC21■□□□□ 0.95
DDX1Q92499 MME-217ENST00000616757 1315 ntTSL 5 BASIC21■□□□□ 0.95
DDX1Q92499 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC21■□□□□ 0.95
DDX1Q92499 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
DDX1Q92499 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
DDX1Q92499 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX1Q92499 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX1Q92499 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC20.99■□□□□ 0.95
DDX1Q92499 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
DDX1Q92499 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.99■□□□□ 0.95
DDX1Q92499 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.99■□□□□ 0.95
DDX1Q92499 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX1Q92499 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
DDX1Q92499 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.99■□□□□ 0.95
DDX1Q92499 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.99■□□□□ 0.95
DDX1Q92499 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.99■□□□□ 0.95
DDX1Q92499 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
DDX1Q92499 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.98■□□□□ 0.95
DDX1Q92499 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX1Q92499 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX1Q92499 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC20.98■□□□□ 0.95
DDX1Q92499 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
DDX1Q92499 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX1Q92499 CALM3-202ENST00000391918 702 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX1Q92499 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC20.98■□□□□ 0.95
DDX1Q92499 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX1Q92499 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC20.98■□□□□ 0.95
DDX1Q92499 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.98■□□□□ 0.95
DDX1Q92499 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
DDX1Q92499 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.98■□□□□ 0.95
DDX1Q92499 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.2 ms