Protein–RNA interactions for Protein: Q8WW32

HMGB4, High mobility group protein B4, humanhuman

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB4Q8WW32 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 CRYGFP-201ENST00000418459 633 ntBASIC19.8■□□□□ 0.76
HMGB4Q8WW32 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 AC097488.1-201ENST00000507834 756 ntBASIC19.8■□□□□ 0.76
HMGB4Q8WW32 KRT18P16-201ENST00000510337 1294 ntBASIC19.8■□□□□ 0.76
HMGB4Q8WW32 AC010203.1-204ENST00000548782 407 ntBASIC19.8■□□□□ 0.76
HMGB4Q8WW32 AC131212.4-201ENST00000623606 975 ntBASIC19.8■□□□□ 0.76
HMGB4Q8WW32 AC092720.2-201ENST00000602388 1665 ntBASIC19.8■□□□□ 0.76
HMGB4Q8WW32 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HMGB4Q8WW32 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 AC004980.1-204ENST00000429707 299 ntBASIC19.79■□□□□ 0.76
HMGB4Q8WW32 AC104076.2-201ENST00000448912 469 ntBASIC19.79■□□□□ 0.76
HMGB4Q8WW32 ECEL1P2-202ENST00000465689 757 ntBASIC19.79■□□□□ 0.76
HMGB4Q8WW32 DUX4L26-201ENST00000489078 1255 ntBASIC19.79■□□□□ 0.76
HMGB4Q8WW32 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 NTF6B-201ENST00000591913 560 ntBASIC19.79■□□□□ 0.76
HMGB4Q8WW32 DGCR10-201ENST00000609839 495 ntBASIC19.79■□□□□ 0.76
HMGB4Q8WW32 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 POMGNT2-202ENST00000441964 2531 ntAPPRIS P1 TSL 4 BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HMGB4Q8WW32 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.78■□□□□ 0.76
HMGB4Q8WW32 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 CPNE9-202ENST00000383831 1751 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 AP005242.2-201ENST00000580065 1175 ntBASIC19.78■□□□□ 0.76
HMGB4Q8WW32 DXO-202ENST00000375349 1667 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HMGB4Q8WW32 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 LPCAT4-201ENST00000314891 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 PRR31-201ENST00000371629 978 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 BID-203ENST00000399765 1879 ntTSL 2 BASIC19.77■□□□□ 0.76
HMGB4Q8WW32 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC19.77■□□□□ 0.75
HMGB4Q8WW32 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC19.77■□□□□ 0.75
HMGB4Q8WW32 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 PHGDH-210ENST00000641115 1638 ntBASIC19.76■□□□□ 0.75
HMGB4Q8WW32 CIRBP-225ENST00000589710 1835 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
HMGB4Q8WW32 WWC2-AS2-201ENST00000578387 2183 ntBASIC19.76■□□□□ 0.75
HMGB4Q8WW32 DBNDD1-201ENST00000002501 2079 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 16 ms