Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 SRD5A1P1-201ENST00000442297 786 ntBASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 AC053503.5-201ENST00000601508 636 ntBASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
SMIM11BQ8TCY0 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 PKD1P1-201ENST00000458669 6805 ntBASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 AP000997.3-201ENST00000623333 2250 ntBASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 NOXO1-202ENST00000356120 1539 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 AC239859.2-201ENST00000444165 318 ntBASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 AC009237.14-201ENST00000609975 1594 ntBASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
SMIM11BQ8TCY0 KRT8P36-201ENST00000489121 1440 ntBASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 RELL2-207ENST00000521367 1780 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 AC116050.2-201ENST00000612102 1779 ntBASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 HSF4-215ENST00000521374 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 PLK3-201ENST00000372201 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 OR6D1P-202ENST00000641007 5290 ntBASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 AL138724.1-201ENST00000606771 1088 ntBASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 AC012354.3-201ENST00000623734 483 ntBASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 RARRES2P11-201ENST00000635158 484 ntBASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
SMIM11BQ8TCY0 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
SMIM11BQ8TCY0 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms