Protein–RNA interactions for Protein: Q8NDP4

ZNF439, Zinc finger protein 439, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF439Q8NDP4 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 GOLGA2P11-201ENST00000562660 1621 ntBASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 HLA-G-202ENST00000376815 851 ntBASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 HLA-G-203ENST00000376818 1127 ntBASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 FAM229A-204ENST00000432622 699 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
ZNF439Q8NDP4 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 TSPAN14-203ENST00000372156 1380 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 AC092118.2-201ENST00000613495 667 ntBASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 MRM1-204ENST00000614766 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
ZNF439Q8NDP4 MOK-233ENST00000524214 1539 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 CLN3-205ENST00000359984 1876 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 SERPINH1P1-201ENST00000419794 1249 ntBASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 TSPY6P-201ENST00000448518 926 ntBASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 AC092666.2-201ENST00000613287 246 ntBASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 AC009237.14-201ENST00000609975 1594 ntBASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.29■□□□□ 0.2
ZNF439Q8NDP4 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
ZNF439Q8NDP4 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 11.4 ms