Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 AC245052.3-201ENST00000450182 901 ntBASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 SMARCA5-AS1-201ENST00000500800 945 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 PHF20L1-214ENST00000485595 1810 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CCDC197Q8NCU1 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 GRAMD1B-217ENST00000640939 1212 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 AL354751.1-201ENST00000412768 1863 ntBASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CCDC197Q8NCU1 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 BICD1-207ENST00000551848 1962 ntBASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 AC068880.1-201ENST00000507289 2297 ntBASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 WIZP1-201ENST00000531444 2299 ntBASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 ZNRF2-201ENST00000323037 3460 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 EIF4EBP1-201ENST00000338825 1020 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 SERBP1P1-201ENST00000396021 1160 ntBASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 AC239859.2-201ENST00000444165 318 ntBASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 AL161938.1-201ENST00000569833 2180 ntBASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC19.55■□□□□ 0.72
CCDC197Q8NCU1 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 SETD9-211ENST00000628593 1306 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 APH1A-202ENST00000360244 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 FAM167A-207ENST00000534308 1642 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC19.54■□□□□ 0.72
CCDC197Q8NCU1 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 POU5F1P4-201ENST00000413175 1085 ntBASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.53■□□□□ 0.72
CCDC197Q8NCU1 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms