Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 GUSBP6-202ENST00000438529 1198 ntBASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 PLEKHJ1-205ENST00000587394 937 ntTSL 2 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
LSMEM1Q8N8F7 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 DUSP5P2-201ENST00000426873 1033 ntBASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 TSPY6P-201ENST00000448518 926 ntBASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 AC005829.2-201ENST00000571422 1056 ntBASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
LSMEM1Q8N8F7 AC116562.4-201ENST00000641316 2276 ntBASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 RBM42-204ENST00000589559 1328 ntTSL 5 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 SLC29A4P1-201ENST00000398760 971 ntBASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 AC091874.3-201ENST00000512672 1195 ntBASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
LSMEM1Q8N8F7 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.02■□□□□ 0.47
LSMEM1Q8N8F7 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LSMEM1Q8N8F7 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LSMEM1Q8N8F7 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.02■□□□□ 0.47
LSMEM1Q8N8F7 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LSMEM1Q8N8F7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
LSMEM1Q8N8F7 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.47
LSMEM1Q8N8F7 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.02■□□□□ 0.47
LSMEM1Q8N8F7 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.47
LSMEM1Q8N8F7 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 AC116351.2-201ENST00000606540 1585 ntBASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 GTF3C5-203ENST00000372099 1999 ntTSL 5 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 AL390719.1-204ENST00000412397 1219 ntBASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 MIR4758-201ENST00000577688 71 ntBASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.01■□□□□ 0.47
LSMEM1Q8N8F7 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 18.5 ms