Protein–RNA interactions for Protein: Q8IUI8

CRLF3, Cytokine receptor-like factor 3, humanhuman

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3Q8IUI8 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
CRLF3Q8IUI8 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 SLC7A5P2-201ENST00000553010 536 ntBASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 MYCNOS-205ENST00000641950 531 ntBASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CRLF3Q8IUI8 ETV4-201ENST00000319349 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 HCG11-201ENST00000411553 5696 ntBASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 PLSCR3-213ENST00000576362 1605 ntTSL 3 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 AC020763.4-201ENST00000623414 4170 ntBASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 NOMO2-201ENST00000330537 4352 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC19.63■□□□□ 0.73
CRLF3Q8IUI8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 TMCO3-201ENST00000375391 2132 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 CROCCP5-201ENST00000436658 830 ntBASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 MDK-213ENST00000617138 635 ntTSL 2 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 TFG-210ENST00000620299 1289 ntTSL 5 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
CRLF3Q8IUI8 IRAK3-203ENST00000545837 1579 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 GCH1-205ENST00000536224 1805 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 HLA-L-209ENST00000420110 1011 ntBASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 AC091799.1-201ENST00000422823 811 ntBASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 AC006970.2-201ENST00000450065 779 ntBASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 PPP1R14BP3-201ENST00000509033 445 ntBASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 KRT18P20-201ENST00000548986 1279 ntBASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 HENMT1-203ENST00000402983 1696 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CRLF3Q8IUI8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.6■□□□□ 0.73
CRLF3Q8IUI8 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.6■□□□□ 0.73
CRLF3Q8IUI8 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms