Protein–RNA interactions for Protein: Q86U70

LDB1, LIM domain-binding protein 1, humanhuman

Predicted RBP Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1Q86U70 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC19.67■□□□□ 0.74
LDB1Q86U70 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
LDB1Q86U70 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.67■□□□□ 0.74
LDB1Q86U70 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.67■□□□□ 0.74
LDB1Q86U70 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC19.67■□□□□ 0.74
LDB1Q86U70 AC073210.2-201ENST00000430369 194 ntBASIC19.67■□□□□ 0.74
LDB1Q86U70 PNMA6B-201ENST00000538162 1200 ntBASIC19.67■□□□□ 0.74
LDB1Q86U70 REXO2-208ENST00000539754 791 ntTSL 2 BASIC19.67■□□□□ 0.74
LDB1Q86U70 HLA-B-256ENST00000639848 1089 ntBASIC19.67■□□□□ 0.74
LDB1Q86U70 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.67■□□□□ 0.74
LDB1Q86U70 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
LDB1Q86U70 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.66■□□□□ 0.74
LDB1Q86U70 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC19.66■□□□□ 0.74
LDB1Q86U70 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC19.66■□□□□ 0.74
LDB1Q86U70 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.66■□□□□ 0.74
LDB1Q86U70 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 BABAM1-213ENST00000601043 1366 ntAPPRIS P3 TSL 2 BASIC19.66■□□□□ 0.74
LDB1Q86U70 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC19.66■□□□□ 0.74
LDB1Q86U70 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.66■□□□□ 0.74
LDB1Q86U70 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.66■□□□□ 0.74
LDB1Q86U70 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
LDB1Q86U70 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.65■□□□□ 0.74
LDB1Q86U70 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.65■□□□□ 0.74
LDB1Q86U70 APTR-205ENST00000447009 902 ntTSL 2 BASIC19.65■□□□□ 0.74
LDB1Q86U70 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.65■□□□□ 0.74
LDB1Q86U70 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.65■□□□□ 0.74
LDB1Q86U70 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LDB1Q86U70 AC060766.5-201ENST00000590539 871 ntBASIC19.65■□□□□ 0.74
LDB1Q86U70 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LDB1Q86U70 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
LDB1Q86U70 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
LDB1Q86U70 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.65■□□□□ 0.74
LDB1Q86U70 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
LDB1Q86U70 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
LDB1Q86U70 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.74
LDB1Q86U70 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDB1Q86U70 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC19.64■□□□□ 0.73
LDB1Q86U70 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC19.64■□□□□ 0.73
LDB1Q86U70 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LDB1Q86U70 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC19.64■□□□□ 0.73
LDB1Q86U70 METTL21A-207ENST00000442521 1003 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LDB1Q86U70 RPS2P52-201ENST00000469610 820 ntBASIC19.64■□□□□ 0.73
LDB1Q86U70 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDB1Q86U70 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.64■□□□□ 0.73
LDB1Q86U70 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.64■□□□□ 0.73
LDB1Q86U70 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
LDB1Q86U70 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.64■□□□□ 0.73
LDB1Q86U70 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC19.64■□□□□ 0.73
LDB1Q86U70 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDB1Q86U70 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
LDB1Q86U70 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.64■□□□□ 0.73
LDB1Q86U70 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
LDB1Q86U70 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDB1Q86U70 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
LDB1Q86U70 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDB1Q86U70 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDB1Q86U70 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
LDB1Q86U70 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC19.63■□□□□ 0.73
LDB1Q86U70 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC19.63■□□□□ 0.73
LDB1Q86U70 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
LDB1Q86U70 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.63■□□□□ 0.73
LDB1Q86U70 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.63■□□□□ 0.73
LDB1Q86U70 AC116351.2-201ENST00000606540 1585 ntBASIC19.63■□□□□ 0.73
LDB1Q86U70 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC19.63■□□□□ 0.73
LDB1Q86U70 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms