Protein–RNA interactions for Protein: Q6PJG6

BRAT1, BRCA1-associated ATM activator 1, humanhuman

Predictions only

Length 821 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1Q6PJG6 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 RPS2P55-201ENST00000397318 883 ntBASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 AC107956.1-201ENST00000494359 873 ntBASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 GOLGA6L3-201ENST00000507199 1679 ntBASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
BRAT1Q6PJG6 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRAT1Q6PJG6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
BRAT1Q6PJG6 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 TMEM230-207ENST00000379286 1735 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 ACADS-202ENST00000411593 1398 ntTSL 2 BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 KRT18P16-201ENST00000510337 1294 ntBASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 AC233702.5-201ENST00000584107 538 ntBASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 Z99916.2-201ENST00000604037 246 ntBASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 HTR7P1-201ENST00000538670 1336 ntBASIC19.76■□□□□ 0.75
BRAT1Q6PJG6 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 AL606970.3-201ENST00000446811 2246 ntTSL 2 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.75■□□□□ 0.75
BRAT1Q6PJG6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 TCF3P1-201ENST00000423021 1937 ntBASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 TUBB8P6-201ENST00000436895 1288 ntBASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
BRAT1Q6PJG6 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
BRAT1Q6PJG6 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAT1Q6PJG6 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
BRAT1Q6PJG6 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
BRAT1Q6PJG6 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms