Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 AC116050.2-201ENST00000612102 1779 ntBASIC18.93■□□□□ 0.62
RNF220Q5VTB9 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
RNF220Q5VTB9 AL390961.4-201ENST00000623958 2535 ntBASIC18.93■□□□□ 0.62
RNF220Q5VTB9 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 CDKN2A-205ENST00000479692 544 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 HCK-203ENST00000375862 1806 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 PTGES2-AS1-201ENST00000443493 2100 ntBASIC18.92■□□□□ 0.62
RNF220Q5VTB9 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 GNB4-204ENST00000468623 1360 ntAPPRIS P1 TSL 2 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 TREX2-202ENST00000334497 1982 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
RNF220Q5VTB9 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 RBM17P2-201ENST00000616397 1405 ntBASIC18.91■□□□□ 0.62
RNF220Q5VTB9 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 KRT18P61-201ENST00000585825 1298 ntBASIC18.91■□□□□ 0.62
RNF220Q5VTB9 SLC25A10-201ENST00000331531 1946 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 GTF2IRD2B-208ENST00000619142 1932 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC18.91■□□□□ 0.62
RNF220Q5VTB9 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 GMPPA-201ENST00000313597 1544 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 EMC7-201ENST00000256545 1155 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 TFG-210ENST00000620299 1289 ntTSL 5 BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 AC019069.1-201ENST00000610008 1333 ntBASIC18.9■□□□□ 0.62
RNF220Q5VTB9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
RNF220Q5VTB9 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF220Q5VTB9 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF220Q5VTB9 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF220Q5VTB9 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF220Q5VTB9 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF220Q5VTB9 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF220Q5VTB9 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.62
RNF220Q5VTB9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF220Q5VTB9 CDH5-202ENST00000539168 1672 ntTSL 2 BASIC18.89■□□□□ 0.61
RNF220Q5VTB9 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
RNF220Q5VTB9 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF220Q5VTB9 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
RNF220Q5VTB9 Z82202.1-201ENST00000623446 1880 ntBASIC18.89■□□□□ 0.61
RNF220Q5VTB9 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.89■□□□□ 0.61
RNF220Q5VTB9 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
RNF220Q5VTB9 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC18.89■□□□□ 0.61
RNF220Q5VTB9 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms