Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
RPL39P62891 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC13.92□□□□□ -0.18
RPL39P62891 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC13.92□□□□□ -0.18
RPL39P62891 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 EBPL-204ENST00000378272 766 ntTSL 3 BASIC13.92□□□□□ -0.18
RPL39P62891 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC13.92□□□□□ -0.18
RPL39P62891 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 NKX2-5-202ENST00000424406 1124 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC13.92□□□□□ -0.18
RPL39P62891 PBX2P1-201ENST00000493219 1291 ntBASIC13.92□□□□□ -0.18
RPL39P62891 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC13.92□□□□□ -0.18
RPL39P62891 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC13.92□□□□□ -0.18
RPL39P62891 AL354811.1-201ENST00000610286 706 ntBASIC13.92□□□□□ -0.18
RPL39P62891 FGF8-207ENST00000618991 856 ntTSL 3 BASIC13.92□□□□□ -0.18
RPL39P62891 AL358852.1-201ENST00000623174 1268 ntBASIC13.92□□□□□ -0.18
RPL39P62891 AMZ1-202ENST00000407112 1862 ntTSL 2 BASIC13.92□□□□□ -0.18
RPL39P62891 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC13.92□□□□□ -0.18
RPL39P62891 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
RPL39P62891 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
RPL39P62891 RASA4CP-201ENST00000424092 1398 ntBASIC13.92□□□□□ -0.18
RPL39P62891 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
RPL39P62891 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
RPL39P62891 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.92□□□□□ -0.18
RPL39P62891 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 CENPS-CORT-204ENST00000602296 1326 ntTSL 3 BASIC13.91□□□□□ -0.18
RPL39P62891 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 AC005332.8-201ENST00000622750 2735 ntBASIC13.91□□□□□ -0.18
RPL39P62891 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
RPL39P62891 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC13.91□□□□□ -0.18
RPL39P62891 DUX4L2-201ENST00000561772 1275 ntBASIC13.91□□□□□ -0.18
RPL39P62891 MMP28-203ENST00000612672 1092 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 DUX4-206ENST00000616166 1275 ntAPPRIS P2 BASIC13.91□□□□□ -0.18
RPL39P62891 MIR6084-201ENST00000622012 110 ntBASIC13.91□□□□□ -0.18
RPL39P62891 DUX4L6-201ENST00000626483 1275 ntBASIC13.91□□□□□ -0.18
RPL39P62891 DUX4L1-201ENST00000627662 1275 ntBASIC13.91□□□□□ -0.18
RPL39P62891 DUX4L8-201ENST00000629013 1275 ntBASIC13.91□□□□□ -0.18
RPL39P62891 DUX4L3-201ENST00000630187 1275 ntBASIC13.91□□□□□ -0.18
RPL39P62891 DUX4L7-201ENST00000630678 1275 ntBASIC13.91□□□□□ -0.18
RPL39P62891 DUX4L5-201ENST00000630834 1275 ntBASIC13.91□□□□□ -0.18
RPL39P62891 AL138781.2-201ENST00000617896 1843 ntBASIC13.91□□□□□ -0.18
RPL39P62891 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
RPL39P62891 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
RPL39P62891 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC13.91□□□□□ -0.18
RPL39P62891 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC13.9□□□□□ -0.18
RPL39P62891 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
RPL39P62891 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC13.9□□□□□ -0.18
RPL39P62891 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
RPL39P62891 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC13.9□□□□□ -0.18
RPL39P62891 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC13.9□□□□□ -0.18
RPL39P62891 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC13.9□□□□□ -0.18
RPL39P62891 AC105265.2-201ENST00000467189 838 ntBASIC13.9□□□□□ -0.18
RPL39P62891 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC13.9□□□□□ -0.18
RPL39P62891 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC13.9□□□□□ -0.18
RPL39P62891 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC13.9□□□□□ -0.18
RPL39P62891 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
RPL39P62891 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 15.9 ms