Protein–RNA interactions for Protein: P61758

VBP1, Prefoldin subunit 3, humanhuman

Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1P61758 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
VBP1P61758 RARRES2P11-201ENST00000635158 484 ntBASIC17.67■□□□□ 0.42
VBP1P61758 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VBP1P61758 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VBP1P61758 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VBP1P61758 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
VBP1P61758 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.67■□□□□ 0.42
VBP1P61758 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
VBP1P61758 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VBP1P61758 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VBP1P61758 C19orf48-202ENST00000391812 1666 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
VBP1P61758 AC005224.4-201ENST00000583262 1652 ntBASIC17.67■□□□□ 0.42
VBP1P61758 NOC2LP1-202ENST00000452600 2235 ntBASIC17.67■□□□□ 0.42
VBP1P61758 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VBP1P61758 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
VBP1P61758 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
VBP1P61758 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
VBP1P61758 SETD6-201ENST00000219315 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 AC009237.14-201ENST00000609975 1594 ntBASIC17.66■□□□□ 0.42
VBP1P61758 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 SUMF1-202ENST00000383843 1447 ntTSL 2 BASIC17.66■□□□□ 0.42
VBP1P61758 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.66■□□□□ 0.42
VBP1P61758 GOLGA2P11-201ENST00000562660 1621 ntBASIC17.66■□□□□ 0.42
VBP1P61758 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
VBP1P61758 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC17.66■□□□□ 0.42
VBP1P61758 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC17.66■□□□□ 0.42
VBP1P61758 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.66■□□□□ 0.42
VBP1P61758 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
VBP1P61758 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
VBP1P61758 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
VBP1P61758 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 AC006333.2-201ENST00000607957 2099 ntBASIC17.65■□□□□ 0.42
VBP1P61758 KRT8P36-201ENST00000489121 1440 ntBASIC17.65■□□□□ 0.42
VBP1P61758 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC17.65■□□□□ 0.42
VBP1P61758 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC17.65■□□□□ 0.42
VBP1P61758 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC17.65■□□□□ 0.42
VBP1P61758 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
VBP1P61758 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.65■□□□□ 0.42
VBP1P61758 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
VBP1P61758 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 HOXC9-203ENST00000508190 1505 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
VBP1P61758 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC17.65■□□□□ 0.42
VBP1P61758 WIZP1-201ENST00000531444 2299 ntBASIC17.65■□□□□ 0.42
VBP1P61758 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
VBP1P61758 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 AC012313.1-201ENST00000593393 3059 ntBASIC17.65■□□□□ 0.42
VBP1P61758 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC17.65■□□□□ 0.42
VBP1P61758 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
VBP1P61758 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
VBP1P61758 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC17.64■□□□□ 0.42
VBP1P61758 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.64■□□□□ 0.42
VBP1P61758 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.41
VBP1P61758 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VBP1P61758 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 GZMM-201ENST00000264553 940 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.64■□□□□ 0.41
VBP1P61758 EEF1DP3-203ENST00000566025 782 ntBASIC17.64■□□□□ 0.41
VBP1P61758 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC17.64■□□□□ 0.41
VBP1P61758 AC053503.5-201ENST00000601508 636 ntBASIC17.64■□□□□ 0.41
VBP1P61758 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
VBP1P61758 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC17.64■□□□□ 0.41
VBP1P61758 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VBP1P61758 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
VBP1P61758 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
VBP1P61758 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.64■□□□□ 0.41
VBP1P61758 EPHX3-202ENST00000435261 1771 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
VBP1P61758 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.63■□□□□ 0.41
VBP1P61758 AC116050.2-201ENST00000612102 1779 ntBASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms