Protein–RNA interactions for Protein: P56748

CLDN8, Claudin-8, humanhuman

Predictions only

Length 225 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN8P56748 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 AL020996.1-203ENST00000536896 2307 ntBASIC18.75■□□□□ 0.59
CLDN8P56748 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC18.75■□□□□ 0.59
CLDN8P56748 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
CLDN8P56748 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN8P56748 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN8P56748 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN8P56748 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.74■□□□□ 0.59
CLDN8P56748 SERP1-205ENST00000487153 657 ntTSL 4 BASIC18.74■□□□□ 0.59
CLDN8P56748 DIMT1-202ENST00000506390 1208 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
CLDN8P56748 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.74■□□□□ 0.59
CLDN8P56748 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC18.74■□□□□ 0.59
CLDN8P56748 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC18.74■□□□□ 0.59
CLDN8P56748 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CLDN8P56748 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC18.74■□□□□ 0.59
CLDN8P56748 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN8P56748 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN8P56748 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLDN8P56748 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN8P56748 AC018553.1-201ENST00000616682 1458 ntBASIC18.73■□□□□ 0.59
CLDN8P56748 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLDN8P56748 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
CLDN8P56748 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.73■□□□□ 0.59
CLDN8P56748 EIF5A-205ENST00000419711 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC18.73■□□□□ 0.59
CLDN8P56748 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN8P56748 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
CLDN8P56748 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
CLDN8P56748 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CLDN8P56748 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC18.73■□□□□ 0.59
CLDN8P56748 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CLDN8P56748 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLDN8P56748 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC18.72■□□□□ 0.59
CLDN8P56748 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.72■□□□□ 0.59
CLDN8P56748 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC18.72■□□□□ 0.59
CLDN8P56748 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 ELOVL2-AS1-201ENST00000456190 737 ntTSL 3 BASIC18.72■□□□□ 0.59
CLDN8P56748 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN8P56748 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC18.72■□□□□ 0.59
CLDN8P56748 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 KRT9-201ENST00000246662 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CLDN8P56748 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 AC116351.2-201ENST00000606540 1585 ntBASIC18.72■□□□□ 0.59
CLDN8P56748 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CLDN8P56748 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
CLDN8P56748 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC18.71■□□□□ 0.59
CLDN8P56748 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN8P56748 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 ORAI3-204ENST00000566237 1393 ntTSL 5 BASIC18.71■□□□□ 0.59
CLDN8P56748 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
CLDN8P56748 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 TOR2A-203ENST00000373284 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.71■□□□□ 0.59
CLDN8P56748 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
CLDN8P56748 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.71■□□□□ 0.59
CLDN8P56748 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CLDN8P56748 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms