Protein–RNA interactions for Protein: P31025

LCN1, Lipocalin-1, humanhuman

Predictions only

Length 176 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCN1P31025 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LCN1P31025 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.22■□□□□ 0.51
LCN1P31025 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC18.22■□□□□ 0.51
LCN1P31025 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LCN1P31025 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC18.22■□□□□ 0.51
LCN1P31025 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.22■□□□□ 0.51
LCN1P31025 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.22■□□□□ 0.51
LCN1P31025 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC18.22■□□□□ 0.51
LCN1P31025 UNC93B5-201ENST00000530315 699 ntBASIC18.22■□□□□ 0.51
LCN1P31025 KLF13-207ENST00000560473 489 ntTSL 3 BASIC18.22■□□□□ 0.51
LCN1P31025 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LCN1P31025 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
LCN1P31025 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.22■□□□□ 0.51
LCN1P31025 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.22■□□□□ 0.51
LCN1P31025 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC18.22■□□□□ 0.51
LCN1P31025 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.22■□□□□ 0.51
LCN1P31025 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.22■□□□□ 0.51
LCN1P31025 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.22■□□□□ 0.51
LCN1P31025 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
LCN1P31025 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 C17orf58-204ENST00000580729 2065 ntTSL 5 BASIC18.21■□□□□ 0.51
LCN1P31025 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC18.21■□□□□ 0.51
LCN1P31025 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC18.21■□□□□ 0.51
LCN1P31025 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC18.21■□□□□ 0.51
LCN1P31025 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 UNC93B4-201ENST00000505679 747 ntBASIC18.21■□□□□ 0.51
LCN1P31025 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.21■□□□□ 0.51
LCN1P31025 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 AL121906.2-201ENST00000621597 723 ntBASIC18.21■□□□□ 0.51
LCN1P31025 AC006557.6-201ENST00000623071 864 ntBASIC18.21■□□□□ 0.51
LCN1P31025 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
LCN1P31025 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
LCN1P31025 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
LCN1P31025 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
LCN1P31025 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC18.2■□□□□ 0.5
LCN1P31025 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.2■□□□□ 0.5
LCN1P31025 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LCN1P31025 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LCN1P31025 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.2■□□□□ 0.5
LCN1P31025 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC18.2■□□□□ 0.5
LCN1P31025 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 RPS2P52-201ENST00000469610 820 ntBASIC18.2■□□□□ 0.5
LCN1P31025 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC18.2■□□□□ 0.5
LCN1P31025 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC18.2■□□□□ 0.5
LCN1P31025 SOX15-203ENST00000570788 1093 ntBASIC18.2■□□□□ 0.5
LCN1P31025 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
LCN1P31025 AC008687.6-201ENST00000596318 630 ntBASIC18.2■□□□□ 0.5
LCN1P31025 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.2■□□□□ 0.5
LCN1P31025 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC18.2■□□□□ 0.5
LCN1P31025 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.2■□□□□ 0.5
LCN1P31025 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC18.2■□□□□ 0.5
LCN1P31025 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.2■□□□□ 0.5
LCN1P31025 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
LCN1P31025 AC018553.1-201ENST00000616682 1458 ntBASIC18.2■□□□□ 0.5
LCN1P31025 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCN1P31025 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCN1P31025 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
LCN1P31025 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LCN1P31025 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCN1P31025 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC18.19■□□□□ 0.5
LCN1P31025 AP000282.1-201ENST00000454622 682 ntTSL 2 BASIC18.19■□□□□ 0.5
LCN1P31025 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.19■□□□□ 0.5
LCN1P31025 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC18.19■□□□□ 0.5
LCN1P31025 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
LCN1P31025 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCN1P31025 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
LCN1P31025 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC18.19■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms