Protein–RNA interactions for Protein: P28329

CHAT, Choline O-acetyltransferase, humanhuman

Predictions only

Length 748 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHATP28329 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHATP28329 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHATP28329 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHATP28329 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CHATP28329 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.77■□□□□ 0.28
CHATP28329 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC16.77■□□□□ 0.28
CHATP28329 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC16.77■□□□□ 0.28
CHATP28329 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC16.77■□□□□ 0.28
CHATP28329 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
CHATP28329 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
CHATP28329 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
CHATP28329 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC16.77■□□□□ 0.28
CHATP28329 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHATP28329 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
CHATP28329 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHATP28329 AP000974.1-201ENST00000623909 2387 ntBASIC16.77■□□□□ 0.27
CHATP28329 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC16.77■□□□□ 0.27
CHATP28329 NTSR2-201ENST00000306928 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
CHATP28329 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.76■□□□□ 0.27
CHATP28329 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.76■□□□□ 0.27
CHATP28329 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.76■□□□□ 0.27
CHATP28329 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC16.76■□□□□ 0.27
CHATP28329 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 MFSD11-216ENST00000590393 1141 ntBASIC16.76■□□□□ 0.27
CHATP28329 AC105020.6-201ENST00000621523 1217 ntBASIC16.76■□□□□ 0.27
CHATP28329 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 EPS8L2-230ENST00000610855 1633 ntTSL 5 BASIC16.76■□□□□ 0.27
CHATP28329 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC16.76■□□□□ 0.27
CHATP28329 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC16.76■□□□□ 0.27
CHATP28329 KRT8P20-201ENST00000423953 1409 ntBASIC16.76■□□□□ 0.27
CHATP28329 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
CHATP28329 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC16.76■□□□□ 0.27
CHATP28329 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
CHATP28329 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC16.76■□□□□ 0.27
CHATP28329 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 RGS3-232ENST00000620489 1503 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
CHATP28329 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
CHATP28329 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 AIRN-201ENST00000601203 4374 ntBASIC16.75■□□□□ 0.27
CHATP28329 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC16.75■□□□□ 0.27
CHATP28329 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC16.75■□□□□ 0.27
CHATP28329 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC16.75■□□□□ 0.27
CHATP28329 AP001271.2-201ENST00000624018 1556 ntBASIC16.75■□□□□ 0.27
CHATP28329 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
CHATP28329 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC16.75■□□□□ 0.27
CHATP28329 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 NAPSA-201ENST00000253719 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC16.75■□□□□ 0.27
CHATP28329 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC16.75■□□□□ 0.27
CHATP28329 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
CHATP28329 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC16.74■□□□□ 0.27
CHATP28329 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
CHATP28329 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 Z82202.1-201ENST00000623446 1880 ntBASIC16.74■□□□□ 0.27
CHATP28329 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 NFKBIB-201ENST00000313582 1159 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 AC137761.2-201ENST00000561729 223 ntBASIC16.74■□□□□ 0.27
CHATP28329 AC145350.3-201ENST00000569033 163 ntBASIC16.74■□□□□ 0.27
CHATP28329 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC16.74■□□□□ 0.27
CHATP28329 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHATP28329 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC16.74■□□□□ 0.27
CHATP28329 RRNAD1-202ENST00000368218 1802 ntAPPRIS ALT2 TSL 3 BASIC16.74■□□□□ 0.27
CHATP28329 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.74■□□□□ 0.27
CHATP28329 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
CHATP28329 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
CHATP28329 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms