Protein–RNA interactions for Protein: P26045

PTPN3, Tyrosine-protein phosphatase non-receptor type 3, humanhuman

Predictions only

Length 913 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3P26045 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN3P26045 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN3P26045 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN3P26045 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.12■□□□□ 0.81
PTPN3P26045 ZNF12-201ENST00000342651 2921 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PTPN3P26045 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN3P26045 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.12■□□□□ 0.81
PTPN3P26045 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PTPN3P26045 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN3P26045 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN3P26045 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PTPN3P26045 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
PTPN3P26045 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.11■□□□□ 0.81
PTPN3P26045 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN3P26045 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC20.11■□□□□ 0.81
PTPN3P26045 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN3P26045 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
PTPN3P26045 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.11■□□□□ 0.81
PTPN3P26045 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.11■□□□□ 0.81
PTPN3P26045 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.11■□□□□ 0.81
PTPN3P26045 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.11■□□□□ 0.81
PTPN3P26045 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.11■□□□□ 0.81
PTPN3P26045 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN3P26045 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.11■□□□□ 0.81
PTPN3P26045 THOP1-202ENST00000395212 1877 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN3P26045 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.11■□□□□ 0.81
PTPN3P26045 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PTPN3P26045 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
PTPN3P26045 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
PTPN3P26045 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN3P26045 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
PTPN3P26045 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.1■□□□□ 0.81
PTPN3P26045 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
PTPN3P26045 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PTPN3P26045 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
PTPN3P26045 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN3P26045 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.1■□□□□ 0.81
PTPN3P26045 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.1■□□□□ 0.81
PTPN3P26045 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.1■□□□□ 0.81
PTPN3P26045 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN3P26045 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
PTPN3P26045 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC20.1■□□□□ 0.81
PTPN3P26045 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
PTPN3P26045 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPN3P26045 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC20.09■□□□□ 0.81
PTPN3P26045 KCNMA1-293ENST00000640969 5789 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
PTPN3P26045 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
PTPN3P26045 APTR-205ENST00000447009 902 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPN3P26045 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.09■□□□□ 0.81
PTPN3P26045 SOX15-203ENST00000570788 1093 ntBASIC20.09■□□□□ 0.81
PTPN3P26045 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.09■□□□□ 0.81
PTPN3P26045 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPN3P26045 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.09■□□□□ 0.81
PTPN3P26045 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.09■□□□□ 0.81
PTPN3P26045 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
PTPN3P26045 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.09■□□□□ 0.81
PTPN3P26045 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPN3P26045 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.09■□□□□ 0.81
PTPN3P26045 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.09■□□□□ 0.81
PTPN3P26045 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN3P26045 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPN3P26045 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN3P26045 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC20.08■□□□□ 0.81
PTPN3P26045 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN3P26045 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN3P26045 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN3P26045 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPN3P26045 AC116562.4-201ENST00000641316 2276 ntBASIC20.08■□□□□ 0.81
PTPN3P26045 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
PTPN3P26045 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN3P26045 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN3P26045 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPN3P26045 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN3P26045 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.08■□□□□ 0.81
PTPN3P26045 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.08■□□□□ 0.81
PTPN3P26045 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN3P26045 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
PTPN3P26045 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms