Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC18.24■□□□□ 0.51
NR4A1P22736 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
NR4A1P22736 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 KMT5B-204ENST00000402185 1881 ntTSL 2 BASIC18.23■□□□□ 0.51
NR4A1P22736 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 CHRDL2-210ENST00000622063 1691 ntTSL 5 BASIC18.23■□□□□ 0.51
NR4A1P22736 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 AC004911.1-201ENST00000416316 871 ntBASIC18.23■□□□□ 0.51
NR4A1P22736 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 KRT18P20-201ENST00000548986 1279 ntBASIC18.23■□□□□ 0.51
NR4A1P22736 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC18.23■□□□□ 0.51
NR4A1P22736 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC18.23■□□□□ 0.51
NR4A1P22736 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
NR4A1P22736 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.23■□□□□ 0.51
NR4A1P22736 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC18.23■□□□□ 0.51
NR4A1P22736 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC18.23■□□□□ 0.51
NR4A1P22736 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC18.23■□□□□ 0.51
NR4A1P22736 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.22■□□□□ 0.51
NR4A1P22736 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NR4A1P22736 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 GAS2L1P2-201ENST00000436355 1356 ntBASIC18.22■□□□□ 0.51
NR4A1P22736 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC18.22■□□□□ 0.51
NR4A1P22736 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.22■□□□□ 0.51
NR4A1P22736 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NR4A1P22736 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.22■□□□□ 0.51
NR4A1P22736 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC18.22■□□□□ 0.51
NR4A1P22736 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC18.22■□□□□ 0.51
NR4A1P22736 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.22■□□□□ 0.51
NR4A1P22736 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC18.22■□□□□ 0.51
NR4A1P22736 AC243773.2-201ENST00000616341 490 ntTSL 2 BASIC18.22■□□□□ 0.51
NR4A1P22736 WWOX-218ENST00000627394 894 ntTSL 5 BASIC18.22■□□□□ 0.51
NR4A1P22736 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC18.22■□□□□ 0.51
NR4A1P22736 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC18.22■□□□□ 0.51
NR4A1P22736 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 AC011484.1-201ENST00000377652 1995 ntBASIC18.22■□□□□ 0.51
NR4A1P22736 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 RHOA-202ENST00000418115 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
NR4A1P22736 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC18.21■□□□□ 0.51
NR4A1P22736 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
NR4A1P22736 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC18.21■□□□□ 0.51
NR4A1P22736 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC18.21■□□□□ 0.51
NR4A1P22736 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
NR4A1P22736 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC18.21■□□□□ 0.51
NR4A1P22736 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.21■□□□□ 0.51
NR4A1P22736 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC18.21■□□□□ 0.51
NR4A1P22736 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC18.21■□□□□ 0.51
NR4A1P22736 AC008175.2-201ENST00000612840 297 ntBASIC18.21■□□□□ 0.51
NR4A1P22736 EXOC3-AS1-202ENST00000623673 1663 ntBASIC18.21■□□□□ 0.51
NR4A1P22736 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC18.21■□□□□ 0.51
NR4A1P22736 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
NR4A1P22736 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.21■□□□□ 0.5
NR4A1P22736 SPATA22-210ENST00000573128 1704 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR4A1P22736 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.2■□□□□ 0.5
NR4A1P22736 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR4A1P22736 TMCO6-203ENST00000394671 1887 ntAPPRIS P1 TSL 2 BASIC18.2■□□□□ 0.5
NR4A1P22736 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.2■□□□□ 0.5
NR4A1P22736 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NR4A1P22736 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC18.2■□□□□ 0.5
NR4A1P22736 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR4A1P22736 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC18.2■□□□□ 0.5
NR4A1P22736 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR4A1P22736 NEDD8-201ENST00000250495 708 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR4A1P22736 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
NR4A1P22736 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC18.2■□□□□ 0.5
NR4A1P22736 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NR4A1P22736 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
NR4A1P22736 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.2■□□□□ 0.5
NR4A1P22736 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms