Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB1P19838 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC20.06■□□□□ 0.8
NFKB1P19838 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.06■□□□□ 0.8
NFKB1P19838 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.06■□□□□ 0.8
NFKB1P19838 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.06■□□□□ 0.8
NFKB1P19838 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.06■□□□□ 0.8
NFKB1P19838 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB1P19838 SOX15-203ENST00000570788 1093 ntBASIC20.06■□□□□ 0.8
NFKB1P19838 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC20.06■□□□□ 0.8
NFKB1P19838 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC20.06■□□□□ 0.8
NFKB1P19838 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC20.06■□□□□ 0.8
NFKB1P19838 SOCS2-207ENST00000549206 2072 ntAPPRIS P1 TSL 3 BASIC20.06■□□□□ 0.8
NFKB1P19838 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.05■□□□□ 0.8
NFKB1P19838 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NFKB1P19838 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
NFKB1P19838 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.05■□□□□ 0.8
NFKB1P19838 PRELID2-204ENST00000505416 738 ntAPPRIS P2 TSL 3 BASIC20.05■□□□□ 0.8
NFKB1P19838 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.05■□□□□ 0.8
NFKB1P19838 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.05■□□□□ 0.8
NFKB1P19838 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NFKB1P19838 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC20.05■□□□□ 0.8
NFKB1P19838 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
NFKB1P19838 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 POLI-202ENST00000406285 2030 ntTSL 2 BASIC20.05■□□□□ 0.8
NFKB1P19838 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC20.05■□□□□ 0.8
NFKB1P19838 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC20.05■□□□□ 0.8
NFKB1P19838 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC20.05■□□□□ 0.8
NFKB1P19838 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 CTNND2-201ENST00000304623 5481 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
NFKB1P19838 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.04■□□□□ 0.8
NFKB1P19838 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB1P19838 TFP1-202ENST00000475455 1573 ntBASIC20.04■□□□□ 0.8
NFKB1P19838 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC20.04■□□□□ 0.8
NFKB1P19838 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB1P19838 TMC6-201ENST00000306591 1681 ntTSL 5 BASIC20.04■□□□□ 0.8
NFKB1P19838 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.04■□□□□ 0.8
NFKB1P19838 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB1P19838 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB1P19838 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB1P19838 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.04■□□□□ 0.8
NFKB1P19838 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.04■□□□□ 0.8
NFKB1P19838 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC20.04■□□□□ 0.8
NFKB1P19838 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB1P19838 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.04■□□□□ 0.8
NFKB1P19838 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC20.04■□□□□ 0.8
NFKB1P19838 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB1P19838 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
NFKB1P19838 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.04■□□□□ 0.8
NFKB1P19838 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
NFKB1P19838 CLN8-208ENST00000635751 1807 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
NFKB1P19838 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC20.04■□□□□ 0.8
NFKB1P19838 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB1P19838 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB1P19838 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB1P19838 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB1P19838 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB1P19838 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB1P19838 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC20.03■□□□□ 0.8
NFKB1P19838 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB1P19838 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC20.03■□□□□ 0.8
NFKB1P19838 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
NFKB1P19838 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.03■□□□□ 0.8
NFKB1P19838 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.03■□□□□ 0.8
NFKB1P19838 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB1P19838 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC20.03■□□□□ 0.8
NFKB1P19838 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC20.03■□□□□ 0.8
NFKB1P19838 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
NFKB1P19838 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC20.03■□□□□ 0.8
NFKB1P19838 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC20.02■□□□□ 0.8
NFKB1P19838 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.8
NFKB1P19838 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC20.02■□□□□ 0.8
NFKB1P19838 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
NFKB1P19838 ABHD17AP6-201ENST00000458502 1044 ntBASIC20.02■□□□□ 0.8
NFKB1P19838 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.8
NFKB1P19838 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC20.02■□□□□ 0.8
NFKB1P19838 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NFKB1P19838 KLF2-202ENST00000592003 564 ntTSL 3 BASIC20.02■□□□□ 0.8
NFKB1P19838 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC20.02■□□□□ 0.8
NFKB1P19838 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
NFKB1P19838 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms