Protein–RNA interactions for Protein: P18031

PTPN1, Tyrosine-protein phosphatase non-receptor type 1, humanhuman

Known RBP Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1P18031 RARRES2P10-201ENST00000564312 460 ntBASIC20.91■□□□□ 0.94
PTPN1P18031 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC20.91■□□□□ 0.94
PTPN1P18031 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.91■□□□□ 0.94
PTPN1P18031 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC20.91■□□□□ 0.94
PTPN1P18031 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC20.91■□□□□ 0.94
PTPN1P18031 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPN1P18031 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.9■□□□□ 0.94
PTPN1P18031 HMOX1-201ENST00000216117 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PTPN1P18031 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC20.9■□□□□ 0.94
PTPN1P18031 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 YBX1P10-201ENST00000444752 975 ntBASIC20.9■□□□□ 0.94
PTPN1P18031 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC20.9■□□□□ 0.94
PTPN1P18031 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPN1P18031 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
PTPN1P18031 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.9■□□□□ 0.94
PTPN1P18031 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
PTPN1P18031 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN1P18031 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN1P18031 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC20.89■□□□□ 0.94
PTPN1P18031 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
PTPN1P18031 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC20.89■□□□□ 0.94
PTPN1P18031 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC20.89■□□□□ 0.94
PTPN1P18031 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN1P18031 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN1P18031 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN1P18031 TCF3P1-201ENST00000423021 1937 ntBASIC20.89■□□□□ 0.93
PTPN1P18031 GDAP1L1-202ENST00000372952 722 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN1P18031 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
PTPN1P18031 MIR718-201ENST00000390190 70 ntBASIC20.89■□□□□ 0.93
PTPN1P18031 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN1P18031 RPS2P55-201ENST00000397318 883 ntBASIC20.89■□□□□ 0.93
PTPN1P18031 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
PTPN1P18031 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN1P18031 AC107956.1-201ENST00000494359 873 ntBASIC20.89■□□□□ 0.93
PTPN1P18031 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN1P18031 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC20.89■□□□□ 0.93
PTPN1P18031 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPN1P18031 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.89■□□□□ 0.93
PTPN1P18031 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.89■□□□□ 0.93
PTPN1P18031 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN1P18031 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.89■□□□□ 0.93
PTPN1P18031 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN1P18031 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN1P18031 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC20.89■□□□□ 0.93
PTPN1P18031 GOLGA6L3-201ENST00000507199 1679 ntBASIC20.89■□□□□ 0.93
PTPN1P18031 RUNX3-202ENST00000338888 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC20.89■□□□□ 0.93
PTPN1P18031 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 AC112907.3-201ENST00000577781 2400 ntBASIC20.88■□□□□ 0.93
PTPN1P18031 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
PTPN1P18031 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PTPN1P18031 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 HTR7P1-201ENST00000538670 1336 ntBASIC20.88■□□□□ 0.93
PTPN1P18031 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC20.88■□□□□ 0.93
PTPN1P18031 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC20.88■□□□□ 0.93
PTPN1P18031 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PTPN1P18031 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC20.88■□□□□ 0.93
PTPN1P18031 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
PTPN1P18031 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 AC009237.14-201ENST00000609975 1594 ntBASIC20.88■□□□□ 0.93
PTPN1P18031 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
PTPN1P18031 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC20.88■□□□□ 0.93
PTPN1P18031 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
PTPN1P18031 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC20.87■□□□□ 0.93
PTPN1P18031 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN1P18031 AL135905.2-201ENST00000584934 1404 ntBASIC20.87■□□□□ 0.93
PTPN1P18031 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN1P18031 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN1P18031 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN1P18031 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN1P18031 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN1P18031 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN1P18031 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PTPN1P18031 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC20.87■□□□□ 0.93
PTPN1P18031 AC012618.2-201ENST00000428058 849 ntBASIC20.87■□□□□ 0.93
PTPN1P18031 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN1P18031 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.87■□□□□ 0.93
PTPN1P18031 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
PTPN1P18031 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
PTPN1P18031 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC20.87■□□□□ 0.93
PTPN1P18031 AC233702.5-201ENST00000584107 538 ntBASIC20.87■□□□□ 0.93
PTPN1P18031 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC20.87■□□□□ 0.93
PTPN1P18031 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms