Protein–RNA interactions for Protein: P12035

KRT3, Keratin, type II cytoskeletal 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3P12035 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
KRT3P12035 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
KRT3P12035 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT3P12035 AC116351.2-201ENST00000606540 1585 ntBASIC20.77■□□□□ 0.92
KRT3P12035 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT3P12035 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT3P12035 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT3P12035 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT3P12035 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT3P12035 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT3P12035 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC20.77■□□□□ 0.92
KRT3P12035 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT3P12035 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC20.77■□□□□ 0.92
KRT3P12035 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC20.77■□□□□ 0.92
KRT3P12035 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.77■□□□□ 0.92
KRT3P12035 SLC29A4P2-201ENST00000504749 1089 ntBASIC20.77■□□□□ 0.92
KRT3P12035 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC20.77■□□□□ 0.92
KRT3P12035 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
KRT3P12035 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC20.77■□□□□ 0.92
KRT3P12035 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC20.77■□□□□ 0.92
KRT3P12035 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
KRT3P12035 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
KRT3P12035 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
KRT3P12035 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
KRT3P12035 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC20.77■□□□□ 0.91
KRT3P12035 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
KRT3P12035 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
KRT3P12035 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.91
KRT3P12035 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
KRT3P12035 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT3P12035 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC20.76■□□□□ 0.91
KRT3P12035 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 CFC1-201ENST00000259216 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 CFC1B-201ENST00000281882 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT3P12035 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC20.76■□□□□ 0.91
KRT3P12035 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
KRT3P12035 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT3P12035 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
KRT3P12035 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT3P12035 OR2A1-AS1-207ENST00000486094 819 ntBASIC20.75■□□□□ 0.91
KRT3P12035 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.75■□□□□ 0.91
KRT3P12035 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 EMC9-206ENST00000560403 872 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT3P12035 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC20.75■□□□□ 0.91
KRT3P12035 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC20.75■□□□□ 0.91
KRT3P12035 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT3P12035 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT3P12035 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT3P12035 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.75■□□□□ 0.91
KRT3P12035 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC20.75■□□□□ 0.91
KRT3P12035 SLC1A7-201ENST00000371491 1306 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
KRT3P12035 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT3P12035 TREX1-205ENST00000625293 1783 ntBASIC20.74■□□□□ 0.91
KRT3P12035 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
KRT3P12035 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
KRT3P12035 AC124283.5-201ENST00000624661 1809 ntBASIC20.74■□□□□ 0.91
KRT3P12035 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT3P12035 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT3P12035 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT3P12035 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
KRT3P12035 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT3P12035 RPS2P52-201ENST00000469610 820 ntBASIC20.74■□□□□ 0.91
KRT3P12035 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.74■□□□□ 0.91
KRT3P12035 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT3P12035 KLF13-207ENST00000560473 489 ntTSL 3 BASIC20.74■□□□□ 0.91
KRT3P12035 GOSR2-208ENST00000573224 1115 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT3P12035 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT3P12035 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT3P12035 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT3P12035 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT3P12035 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
KRT3P12035 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.74■□□□□ 0.91
KRT3P12035 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC20.74■□□□□ 0.91
KRT3P12035 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC20.73■□□□□ 0.91
KRT3P12035 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
KRT3P12035 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.73■□□□□ 0.91
KRT3P12035 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms