Protein–RNA interactions for Protein: P03999

OPN1SW, Short-wave-sensitive opsin 1, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
OPN1SWP03999 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
OPN1SWP03999 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.4■□□□□ 0.54
OPN1SWP03999 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.39■□□□□ 0.54
OPN1SWP03999 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
OPN1SWP03999 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
OPN1SWP03999 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.54
OPN1SWP03999 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
OPN1SWP03999 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC18.39■□□□□ 0.53
OPN1SWP03999 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 CARD9-201ENST00000371732 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC18.39■□□□□ 0.53
OPN1SWP03999 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.39■□□□□ 0.53
OPN1SWP03999 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
OPN1SWP03999 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC18.39■□□□□ 0.53
OPN1SWP03999 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.39■□□□□ 0.53
OPN1SWP03999 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
OPN1SWP03999 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
OPN1SWP03999 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
OPN1SWP03999 AP001271.2-201ENST00000624018 1556 ntBASIC18.38■□□□□ 0.53
OPN1SWP03999 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.38■□□□□ 0.53
OPN1SWP03999 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC18.38■□□□□ 0.53
OPN1SWP03999 SOCS2-206ENST00000549122 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.38■□□□□ 0.53
OPN1SWP03999 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
OPN1SWP03999 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.38■□□□□ 0.53
OPN1SWP03999 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC18.38■□□□□ 0.53
OPN1SWP03999 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.38■□□□□ 0.53
OPN1SWP03999 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
OPN1SWP03999 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 AL032819.2-201ENST00000624543 2162 ntBASIC18.38■□□□□ 0.53
OPN1SWP03999 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
OPN1SWP03999 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
OPN1SWP03999 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC18.37■□□□□ 0.53
OPN1SWP03999 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC18.37■□□□□ 0.53
OPN1SWP03999 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
OPN1SWP03999 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC18.37■□□□□ 0.53
OPN1SWP03999 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.37■□□□□ 0.53
OPN1SWP03999 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
OPN1SWP03999 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC18.37■□□□□ 0.53
OPN1SWP03999 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 PYCR3-203ENST00000433751 1000 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
OPN1SWP03999 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.37■□□□□ 0.53
OPN1SWP03999 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.37■□□□□ 0.53
OPN1SWP03999 AC069236.1-201ENST00000604339 616 ntBASIC18.37■□□□□ 0.53
OPN1SWP03999 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.37■□□□□ 0.53
OPN1SWP03999 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC18.37■□□□□ 0.53
OPN1SWP03999 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.37■□□□□ 0.53
OPN1SWP03999 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
OPN1SWP03999 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPN1SWP03999 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPN1SWP03999 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPN1SWP03999 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPN1SWP03999 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
OPN1SWP03999 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPN1SWP03999 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPN1SWP03999 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
OPN1SWP03999 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
OPN1SWP03999 HLA-G-202ENST00000376815 851 ntBASIC18.36■□□□□ 0.53
OPN1SWP03999 HLA-G-203ENST00000376818 1127 ntBASIC18.36■□□□□ 0.53
OPN1SWP03999 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms