Protein–RNA interactions for Protein: O94993

SOX30, Transcription factor SOX-30, humanhuman

Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX30O94993 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.35■□□□□ 0.53
SOX30O94993 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC18.35■□□□□ 0.53
SOX30O94993 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
SOX30O94993 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SOX30O94993 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX30O94993 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SOX30O94993 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
SOX30O94993 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC18.34■□□□□ 0.53
SOX30O94993 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.34■□□□□ 0.53
SOX30O94993 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX30O94993 TRMU-201ENST00000290846 1940 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX30O94993 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SOX30O94993 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX30O94993 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
SOX30O94993 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
SOX30O94993 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SOX30O94993 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
SOX30O94993 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.34■□□□□ 0.53
SOX30O94993 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
SOX30O94993 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SOX30O94993 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SOX30O94993 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
SOX30O94993 MAP3K14-AS1-203ENST00000585780 2475 ntTSL 2 BASIC18.33■□□□□ 0.53
SOX30O94993 DBNDD2-206ENST00000372720 1481 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SOX30O94993 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SOX30O94993 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
SOX30O94993 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
SOX30O94993 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.33■□□□□ 0.53
SOX30O94993 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC18.33■□□□□ 0.52
SOX30O94993 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 MDK-204ENST00000395569 686 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC18.33■□□□□ 0.52
SOX30O94993 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 AC069152.1-201ENST00000438030 544 ntBASIC18.33■□□□□ 0.52
SOX30O94993 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.33■□□□□ 0.52
SOX30O94993 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.33■□□□□ 0.52
SOX30O94993 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC18.33■□□□□ 0.52
SOX30O94993 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC18.33■□□□□ 0.52
SOX30O94993 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.33■□□□□ 0.52
SOX30O94993 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC18.33■□□□□ 0.52
SOX30O94993 AFG3L1P-217ENST00000557444 2447 ntBASIC18.33■□□□□ 0.52
SOX30O94993 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
SOX30O94993 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC18.33■□□□□ 0.52
SOX30O94993 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 AC092368.3-202ENST00000574180 1591 ntBASIC18.33■□□□□ 0.52
SOX30O94993 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.33■□□□□ 0.52
SOX30O94993 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
SOX30O94993 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
SOX30O94993 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC18.32■□□□□ 0.52
SOX30O94993 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
SOX30O94993 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
SOX30O94993 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
SOX30O94993 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC18.31■□□□□ 0.52
SOX30O94993 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 PSPN-201ENST00000245810 471 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
SOX30O94993 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 HES2-206ENST00000489730 730 ntTSL 2 BASIC18.31■□□□□ 0.52
SOX30O94993 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.31■□□□□ 0.52
SOX30O94993 AC018553.1-201ENST00000616682 1458 ntBASIC18.31■□□□□ 0.52
SOX30O94993 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
SOX30O94993 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.31■□□□□ 0.52
SOX30O94993 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms