Protein–RNA interactions for Protein: O75841

UPK1B, Uroplakin-1b, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1BO75841 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
UPK1BO75841 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
UPK1BO75841 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
UPK1BO75841 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.19■□□□□ 0.34
UPK1BO75841 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC17.19■□□□□ 0.34
UPK1BO75841 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
UPK1BO75841 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC17.19■□□□□ 0.34
UPK1BO75841 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 APLP2-204ENST00000345598 1862 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC17.19■□□□□ 0.34
UPK1BO75841 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 DUX4L18-201ENST00000553347 1267 ntBASIC17.19■□□□□ 0.34
UPK1BO75841 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC17.19■□□□□ 0.34
UPK1BO75841 MIR7108-201ENST00000614319 87 ntBASIC17.19■□□□□ 0.34
UPK1BO75841 RTCA-201ENST00000260563 1534 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 ST6GALNAC6-215ENST00000542456 2018 ntTSL 2 BASIC17.19■□□□□ 0.34
UPK1BO75841 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
UPK1BO75841 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.19■□□□□ 0.34
UPK1BO75841 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
UPK1BO75841 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC17.19■□□□□ 0.34
UPK1BO75841 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.19■□□□□ 0.34
UPK1BO75841 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
UPK1BO75841 AC093525.10-201ENST00000625130 1569 ntBASIC17.19■□□□□ 0.34
UPK1BO75841 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC17.18■□□□□ 0.34
UPK1BO75841 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC17.18■□□□□ 0.34
UPK1BO75841 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 AZIN2-204ENST00000373443 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
UPK1BO75841 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.18■□□□□ 0.34
UPK1BO75841 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC17.18■□□□□ 0.34
UPK1BO75841 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC17.18■□□□□ 0.34
UPK1BO75841 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
UPK1BO75841 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 KRT18P60-201ENST00000312876 1297 ntBASIC17.18■□□□□ 0.34
UPK1BO75841 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.18■□□□□ 0.34
UPK1BO75841 AC010525.1-201ENST00000585559 441 ntBASIC17.18■□□□□ 0.34
UPK1BO75841 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC17.18■□□□□ 0.34
UPK1BO75841 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.18■□□□□ 0.34
UPK1BO75841 U85056.1-201ENST00000616429 682 ntBASIC17.18■□□□□ 0.34
UPK1BO75841 AC074183.2-201ENST00000623112 922 ntBASIC17.18■□□□□ 0.34
UPK1BO75841 PCDHB2-202ENST00000622947 2231 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.18■□□□□ 0.34
UPK1BO75841 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
UPK1BO75841 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC17.18■□□□□ 0.34
UPK1BO75841 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
UPK1BO75841 AP004607.4-201ENST00000530158 1459 ntBASIC17.18■□□□□ 0.34
UPK1BO75841 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1BO75841 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1BO75841 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1BO75841 BBC3-202ENST00000341983 1538 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1BO75841 POLDIP2-202ENST00000618887 1524 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1BO75841 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1BO75841 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1BO75841 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.17■□□□□ 0.34
UPK1BO75841 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1BO75841 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC17.17■□□□□ 0.34
UPK1BO75841 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC17.17■□□□□ 0.34
UPK1BO75841 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1BO75841 AC124067.4-201ENST00000519691 2379 ntBASIC17.17■□□□□ 0.34
UPK1BO75841 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1BO75841 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
UPK1BO75841 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC17.17■□□□□ 0.34
UPK1BO75841 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
UPK1BO75841 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1BO75841 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
UPK1BO75841 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
UPK1BO75841 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1BO75841 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1BO75841 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK1BO75841 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
UPK1BO75841 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1BO75841 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1BO75841 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.16■□□□□ 0.34
UPK1BO75841 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1BO75841 BEX3-202ENST00000372634 753 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK1BO75841 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UPK1BO75841 RNF146-206ENST00000480444 843 ntTSL 2 BASIC17.16■□□□□ 0.34
UPK1BO75841 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC17.16■□□□□ 0.34
UPK1BO75841 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
UPK1BO75841 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
UPK1BO75841 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 21.3 ms