Protein–RNA interactions for Protein: O60925

PFDN1, Prefoldin subunit 1, humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1O60925 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
PFDN1O60925 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.69■□□□□ 0.42
PFDN1O60925 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
PFDN1O60925 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.68■□□□□ 0.42
PFDN1O60925 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 TREX1-205ENST00000625293 1783 ntBASIC17.68■□□□□ 0.42
PFDN1O60925 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 WBP1-202ENST00000393972 1325 ntTSL 2 BASIC17.68■□□□□ 0.42
PFDN1O60925 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
PFDN1O60925 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.68■□□□□ 0.42
PFDN1O60925 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
PFDN1O60925 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
PFDN1O60925 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.67■□□□□ 0.42
PFDN1O60925 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC17.67■□□□□ 0.42
PFDN1O60925 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PFDN1O60925 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 CICP6-201ENST00000457191 2729 ntBASIC17.67■□□□□ 0.42
PFDN1O60925 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PFDN1O60925 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 YPEL1-202ENST00000403503 466 ntTSL 3 BASIC17.67■□□□□ 0.42
PFDN1O60925 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PFDN1O60925 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC17.67■□□□□ 0.42
PFDN1O60925 OR6D1P-203ENST00000641209 4860 ntBASIC17.67■□□□□ 0.42
PFDN1O60925 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 GPC1-201ENST00000264039 3713 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 SEC11A-201ENST00000268220 1656 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
PFDN1O60925 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 NSMF-203ENST00000371472 1852 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
PFDN1O60925 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC17.67■□□□□ 0.42
PFDN1O60925 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC17.67■□□□□ 0.42
PFDN1O60925 AL161756.1-202ENST00000359491 1717 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
PFDN1O60925 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.66■□□□□ 0.42
PFDN1O60925 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PFDN1O60925 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
PFDN1O60925 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
PFDN1O60925 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
PFDN1O60925 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC17.66■□□□□ 0.42
PFDN1O60925 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.66■□□□□ 0.42
PFDN1O60925 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
PFDN1O60925 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 AL162727.3-201ENST00000635661 2787 ntBASIC17.65■□□□□ 0.42
PFDN1O60925 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
PFDN1O60925 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
PFDN1O60925 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 NKIRAS2-208ENST00000462043 585 ntTSL 4 BASIC17.65■□□□□ 0.42
PFDN1O60925 MOB2-207ENST00000614710 705 ntTSL 5 BASIC17.65■□□□□ 0.42
PFDN1O60925 SAP25-204ENST00000622764 1031 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
PFDN1O60925 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
PFDN1O60925 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
PFDN1O60925 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
PFDN1O60925 AL596257.1-201ENST00000641463 2694 ntBASIC17.65■□□□□ 0.42
PFDN1O60925 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms