Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BRD4O60885 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC27.35■■□□□ 1.97
BRD4O60885 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC27.35■■□□□ 1.97
BRD4O60885 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC27.35■■□□□ 1.97
BRD4O60885 POLD2-202ENST00000406581 2158 ntAPPRIS P1 TSL 2 BASIC27.35■■□□□ 1.97
BRD4O60885 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BRD4O60885 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC27.35■■□□□ 1.97
BRD4O60885 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
BRD4O60885 CPT2-203ENST00000635862 2319 ntTSL 5 BASIC27.35■■□□□ 1.97
BRD4O60885 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
BRD4O60885 ENOSF1-201ENST00000251101 1867 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BRD4O60885 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
BRD4O60885 KSR1P1-201ENST00000446298 240 ntBASIC27.35■■□□□ 1.97
BRD4O60885 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BRD4O60885 AP002982.1-201ENST00000492365 877 ntBASIC27.35■■□□□ 1.97
BRD4O60885 CBFB-203ENST00000561924 584 ntTSL 5 BASIC27.35■■□□□ 1.97
BRD4O60885 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
BRD4O60885 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC27.34■■□□□ 1.97
BRD4O60885 CARM1-201ENST00000327064 3330 ntAPPRIS P2 TSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC27.34■■□□□ 1.97
BRD4O60885 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 TMEM243-201ENST00000257637 1063 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 UNC93B2-201ENST00000285383 730 ntBASIC27.34■■□□□ 1.97
BRD4O60885 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC27.34■■□□□ 1.97
BRD4O60885 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
BRD4O60885 AC079598.2-202ENST00000546624 1451 ntBASIC27.33■■□□□ 1.97
BRD4O60885 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
BRD4O60885 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC27.33■■□□□ 1.97
BRD4O60885 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
BRD4O60885 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
BRD4O60885 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC27.33■■□□□ 1.97
BRD4O60885 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.97
BRD4O60885 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.97
BRD4O60885 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC27.33■■□□□ 1.97
BRD4O60885 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC27.33■■□□□ 1.97
BRD4O60885 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC27.33■■□□□ 1.97
BRD4O60885 SMG8-203ENST00000578922 2178 ntBASIC27.33■■□□□ 1.96
BRD4O60885 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
BRD4O60885 KRT8P20-201ENST00000423953 1409 ntBASIC27.32■■□□□ 1.96
BRD4O60885 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC27.32■■□□□ 1.96
BRD4O60885 NAE1-201ENST00000290810 1837 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
BRD4O60885 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
BRD4O60885 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
BRD4O60885 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
BRD4O60885 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC27.32■■□□□ 1.96
BRD4O60885 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC27.32■■□□□ 1.96
BRD4O60885 TMPOP1-202ENST00000424642 1267 ntBASIC27.32■■□□□ 1.96
BRD4O60885 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC27.32■■□□□ 1.96
BRD4O60885 AC092865.7-201ENST00000641832 219 ntBASIC27.32■■□□□ 1.96
BRD4O60885 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
BRD4O60885 BACE1-209ENST00000513780 1465 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
BRD4O60885 LINC01558-202ENST00000495520 1652 ntTSL 2 BASIC27.32■■□□□ 1.96
BRD4O60885 ARHGEF4-202ENST00000355771 1872 ntAPPRIS ALT2 TSL 1 (best) BASIC27.32■■□□□ 1.96
BRD4O60885 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC27.31■■□□□ 1.96
BRD4O60885 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
BRD4O60885 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
BRD4O60885 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC27.31■■□□□ 1.96
BRD4O60885 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC27.31■■□□□ 1.96
BRD4O60885 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC27.31■■□□□ 1.96
BRD4O60885 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
BRD4O60885 DPP3P2-201ENST00000416030 1696 ntBASIC27.31■■□□□ 1.96
BRD4O60885 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC27.31■■□□□ 1.96
BRD4O60885 P4HB-223ENST00000576390 439 ntTSL 4 BASIC27.31■■□□□ 1.96
BRD4O60885 RN7SL850P-201ENST00000579959 291 ntBASIC27.31■■□□□ 1.96
BRD4O60885 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
BRD4O60885 NSDHL-201ENST00000370274 1929 ntAPPRIS P2 TSL 1 (best) BASIC27.31■■□□□ 1.96
BRD4O60885 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC27.31■■□□□ 1.96
BRD4O60885 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC27.31■■□□□ 1.96
BRD4O60885 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC27.3■■□□□ 1.96
BRD4O60885 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC27.3■■□□□ 1.96
BRD4O60885 GYG1-202ENST00000345003 2052 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
BRD4O60885 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
BRD4O60885 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC27.3■■□□□ 1.96
BRD4O60885 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC27.3■■□□□ 1.96
BRD4O60885 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
BRD4O60885 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC27.3■■□□□ 1.96
BRD4O60885 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC27.3■■□□□ 1.96
BRD4O60885 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
BRD4O60885 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
BRD4O60885 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC27.3■■□□□ 1.96
BRD4O60885 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC27.3■■□□□ 1.96
BRD4O60885 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC27.3■■□□□ 1.96
BRD4O60885 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
BRD4O60885 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC27.29■■□□□ 1.96
BRD4O60885 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC27.29■■□□□ 1.96
BRD4O60885 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC27.29■■□□□ 1.96
BRD4O60885 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC27.29■■□□□ 1.96
BRD4O60885 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC27.29■■□□□ 1.96
BRD4O60885 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC27.29■■□□□ 1.96
BRD4O60885 MIR6786-201ENST00000616843 113 ntBASIC27.29■■□□□ 1.96
BRD4O60885 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
BRD4O60885 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
BRD4O60885 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC27.29■■□□□ 1.96
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms