Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 HMOX2-208ENST00000570646 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.79■□□□□ 0.44
ZIC3O60481 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
ZIC3O60481 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC17.79■□□□□ 0.44
ZIC3O60481 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC17.79■□□□□ 0.44
ZIC3O60481 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC17.79■□□□□ 0.44
ZIC3O60481 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC17.79■□□□□ 0.44
ZIC3O60481 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
ZIC3O60481 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
ZIC3O60481 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 SLC17A7-201ENST00000221485 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC17.78■□□□□ 0.44
ZIC3O60481 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.78■□□□□ 0.44
ZIC3O60481 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 RPS2P4-201ENST00000476944 856 ntBASIC17.78■□□□□ 0.44
ZIC3O60481 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.78■□□□□ 0.44
ZIC3O60481 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC17.78■□□□□ 0.44
ZIC3O60481 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC17.78■□□□□ 0.44
ZIC3O60481 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.78■□□□□ 0.44
ZIC3O60481 RARRES2P10-201ENST00000564312 460 ntBASIC17.78■□□□□ 0.44
ZIC3O60481 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC17.78■□□□□ 0.44
ZIC3O60481 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.78■□□□□ 0.44
ZIC3O60481 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
ZIC3O60481 GTF2IRD2B-210ENST00000629105 1910 ntTSL 5 BASIC17.78■□□□□ 0.44
ZIC3O60481 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.78■□□□□ 0.44
ZIC3O60481 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
ZIC3O60481 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZIC3O60481 PSKH2-201ENST00000276616 1322 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZIC3O60481 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ZIC3O60481 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZIC3O60481 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZIC3O60481 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZIC3O60481 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZIC3O60481 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
ZIC3O60481 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
ZIC3O60481 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
ZIC3O60481 RPS2P55-201ENST00000397318 883 ntBASIC17.77■□□□□ 0.44
ZIC3O60481 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC17.77■□□□□ 0.44
ZIC3O60481 AC107956.1-201ENST00000494359 873 ntBASIC17.77■□□□□ 0.44
ZIC3O60481 KRT18P16-201ENST00000510337 1294 ntBASIC17.77■□□□□ 0.44
ZIC3O60481 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.77■□□□□ 0.44
ZIC3O60481 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC17.77■□□□□ 0.44
ZIC3O60481 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZIC3O60481 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
ZIC3O60481 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
ZIC3O60481 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.77■□□□□ 0.44
ZIC3O60481 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZIC3O60481 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.43
ZIC3O60481 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC17.77■□□□□ 0.43
ZIC3O60481 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZIC3O60481 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC17.77■□□□□ 0.43
ZIC3O60481 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
ZIC3O60481 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ZIC3O60481 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ZIC3O60481 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
ZIC3O60481 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ZIC3O60481 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 TMEM179-206ENST00000616017 1645 ntBASIC17.76■□□□□ 0.43
ZIC3O60481 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC17.76■□□□□ 0.43
ZIC3O60481 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ZIC3O60481 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.76■□□□□ 0.43
ZIC3O60481 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
ZIC3O60481 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.76■□□□□ 0.43
ZIC3O60481 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.76■□□□□ 0.43
ZIC3O60481 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.76■□□□□ 0.43
ZIC3O60481 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
ZIC3O60481 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC17.76■□□□□ 0.43
ZIC3O60481 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
ZIC3O60481 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms