Protein–RNA interactions for Protein: Q95604

HLA-C, HLA class I histocompatibility antigen, Cw-17 alpha chain, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-CQ95604 MCC-209ENST00000515367 3844 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 RNA5SP216-201ENST00000516111 123 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 Y_RNA.693-201ENST00000516641 110 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AC131935.1-201ENST00000524621 333 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 CASP1-216ENST00000534497 825 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AC015722.1-201ENST00000557499 385 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AC138207.8-204ENST00000579588 527 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 BNIP3P22-201ENST00000593399 556 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AL596327.1-201ENST00000603629 213 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AL031281.2-201ENST00000606754 748 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AC008250.2-201ENST00000615261 205 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 AC018692.2-201ENST00000624130 348 ntBASIC8.26□□□□□ -1.09
HLA-CQ95604 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 CACNB2-204ENST00000377315 3461 ntAPPRIS ALT1 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 FLJ21408-201ENST00000499939 2594 ntTSL 2 BASIC8.26□□□□□ -1.09
HLA-CQ95604 AMYH02020865.1-201ENST00000621140 2591 ntTSL 2 BASIC8.26□□□□□ -1.09
HLA-CQ95604 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 ZNF189-204ENST00000615466 2316 ntTSL 3 BASIC8.26□□□□□ -1.09
HLA-CQ95604 TNC-202ENST00000350763 7641 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 CACNA1D-203ENST00000422281 6414 ntAPPRIS ALT2 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 BPTF-203ENST00000335221 2627 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 LINC02177-201ENST00000564305 5298 ntTSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 LINC01660-204ENST00000619172 3572 ntTSL 5 BASIC8.26□□□□□ -1.09
HLA-CQ95604 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC8.26□□□□□ -1.09
HLA-CQ95604 NAALAD2-210ENST00000534061 3600 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 STEAP3-AS1-201ENST00000454260 3218 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 MLANA-203ENST00000381477 2415 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 SEMA3E-202ENST00000427262 2414 ntAPPRIS ALT2 TSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 GSK3A-202ENST00000398249 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 IFT122-202ENST00000347300 3841 ntAPPRIS ALT2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 IPO11-201ENST00000325324 4356 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 SLC17A4-202ENST00000397076 2331 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 TIAM2-208ENST00000461783 6981 ntAPPRIS P1 TSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 SKAP2-201ENST00000345317 3998 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 ENTPD1-203ENST00000371207 1903 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 IL15-207ENST00000514653 1388 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 DLGAP1-AS2-202ENST00000573177 1388 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 LINC02418-202ENST00000567788 4592 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 MTHFD1P1-201ENST00000413059 2764 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 ZNF33BP1-201ENST00000452497 1834 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 SLC9B2-204ENST00000503230 1826 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 DLGAP5-201ENST00000247191 2973 ntAPPRIS P3 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 RNA5SP389-201ENST00000362610 115 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 RNA5SP226-201ENST00000362653 115 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 RNU6-1339P-201ENST00000363574 91 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 RAET1G-201ENST00000367360 1107 ntAPPRIS P2 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 MCTS1-202ENST00000371317 1018 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 OR51A2-201ENST00000380371 942 ntAPPRIS P1 BASIC8.25□□□□□ -1.09
HLA-CQ95604 AL451061.1-201ENST00000407887 862 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 RNU2-42P-201ENST00000410697 113 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AL773545.3-201ENST00000414297 706 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AC004986.1-201ENST00000414855 607 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AL713965.1-201ENST00000421166 230 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC8.25□□□□□ -1.09
HLA-CQ95604 MTCO2P12-201ENST00000427426 682 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AL138899.2-201ENST00000439139 499 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AL035416.1-201ENST00000443012 767 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 OR51P1P-201ENST00000447547 942 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AC009153.1-201ENST00000485799 496 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AHI1-208ENST00000488690 712 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 SNRPCP11-201ENST00000492453 205 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AC139272.1-201ENST00000505516 640 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AC111194.2-201ENST00000511222 455 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 AC010493.1-201ENST00000513479 292 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AC008700.1-202ENST00000513657 468 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 LINC01094-206ENST00000514130 594 ntTSL 4 BASIC8.25□□□□□ -1.09
HLA-CQ95604 MTCO1P30-201ENST00000515244 580 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 OR4A45P-201ENST00000529954 901 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AC024405.1-201ENST00000532521 1042 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC8.25□□□□□ -1.09
HLA-CQ95604 UBE2CP4-201ENST00000561405 535 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 PPP4R1-AS1-201ENST00000582435 379 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 AC011933.4-201ENST00000585081 403 ntTSL 3 BASIC8.25□□□□□ -1.09
HLA-CQ95604 AL121782.1-201ENST00000611242 413 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AL161931.1-201ENST00000612768 246 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AL391903.2-201ENST00000614532 247 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AC244100.1-201ENST00000618141 407 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 AC092650.2-201ENST00000619984 902 ntBASIC8.25□□□□□ -1.09
HLA-CQ95604 AP005242.3-201ENST00000623604 607 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 AC092574.2-201ENST00000631198 753 ntTSL 3 BASIC8.25□□□□□ -1.09
HLA-CQ95604 AC002115.2-201ENST00000640449 603 ntAPPRIS P1 TSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 FGFR2-206ENST00000358487 4255 ntAPPRIS ALT1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 RBM44-206ENST00000611254 1427 ntTSL 2 BASIC8.25□□□□□ -1.09
HLA-CQ95604 ENOX2-207ENST00000610637 2422 ntTSL 5 BASIC8.25□□□□□ -1.09
HLA-CQ95604 FBXW7-205ENST00000603548 2562 ntAPPRIS P4 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 RBFOX2-207ENST00000414461 1706 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 C4orf26-201ENST00000311623 1874 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 TBC1D5-209ENST00000429383 3156 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC8.25□□□□□ -1.09
HLA-CQ95604 ABCE1-201ENST00000296577 3921 ntAPPRIS P1 TSL 1 (best) BASIC8.25□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 69.8 ms