RNA–Protein interactions for RNA: ENST00000410697.1

RNU2-42P-201, Transcript of RNA, U2 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU2-42P, Length 113 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-42P-201ENST00000410697 AEBP2Q6ZN18 517 aaPredicted RBP19.14■□□□□ 0.65
RNU2-42P-201ENST00000410697 CHIC1Q5VXU3 224 aa19.1■□□□□ 0.65
RNU2-42P-201ENST00000410697 PHF23Q9BUL5 403 aaPredicted RBP16.75■□□□□ 0.27
RNU2-42P-201ENST00000410697 SENP3Q9H4L4 574 aaPredicted RBP16.48■□□□□ 0.23
RNU2-42P-201ENST00000410697 POTEDQ86YR6 584 aa16.05■□□□□ 0.16
RNU2-42P-201ENST00000410697 PLPPR3Q6T4P5 718 aa15.7■□□□□ 0.1
RNU2-42P-201ENST00000410697 FOXD1Q16676 465 aa15.44■□□□□ 0.06
RNU2-42P-201ENST00000410697 MSH5O43196 834 aa14.84□□□□□ -0.03
RNU2-42P-201ENST00000410697 ADRA2BP18089 450 aa14.67□□□□□ -0.06
RNU2-42P-201ENST00000410697 PPP6R1Q9UPN7 881 aa14.66□□□□□ -0.06
RNU2-42P-201ENST00000410697 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
RNU2-42P-201ENST00000410697 PPP4R3CPQ6ZMV5 832 aa13.82□□□□□ -0.2
RNU2-42P-201ENST00000410697 KCNA4P22459 653 aa13.81□□□□□ -0.2
RNU2-42P-201ENST00000410697 NCBP3Q53F19 620 aaKnown RBP13.63□□□□□ -0.23
RNU2-42P-201ENST00000410697 SCAF1Q9H7N4 1312 aaKnown RBP13.6□□□□□ -0.23
RNU2-42P-201ENST00000410697 CNKSR2Q8WXI2 1034 aa13.41□□□□□ -0.26
RNU2-42P-201ENST00000410697 CACNB1Q02641 598 aaPredicted RBP13.35□□□□□ -0.27
RNU2-42P-201ENST00000410697 NPM3O75607 178 aaKnown RBP13.33□□□□□ -0.28
RNU2-42P-201ENST00000410697 SLC4A1APQ9BWU0 796 aaKnown RBP13.26□□□□□ -0.29
RNU2-42P-201ENST00000410697 MAPK8IP2Q13387 824 aaPredicted RBP13.19□□□□□ -0.3
RNU2-42P-201ENST00000410697 EHMT2Q96KQ7 1210 aa13.16□□□□□ -0.3
RNU2-42P-201ENST00000410697 RNF216Q9NWF9 866 aaPredicted RBP13.07□□□□□ -0.32
RNU2-42P-201ENST00000410697 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
RNU2-42P-201ENST00000410697 DNAJC5BQ9UF47 199 aa13.04□□□□□ -0.32
RNU2-42P-201ENST00000410697 HOXD11P31277 338 aaPredicted RBP12.92□□□□□ -0.34
RNU2-42P-201ENST00000410697 CSRNP3Q8WYN3 585 aa12.91□□□□□ -0.34
RNU2-42P-201ENST00000410697 FOXD4L1Q9NU39 408 aa12.69□□□□□ -0.38
RNU2-42P-201ENST00000410697 ZBTB22O15209 634 aa12.67□□□□□ -0.38
RNU2-42P-201ENST00000410697 RNF39Q9H2S5 420 aa12.55□□□□□ -0.4
RNU2-42P-201ENST00000410697 DCAF8L1A6NGE4 600 aa12.53□□□□□ -0.4
RNU2-42P-201ENST00000410697 SLC4A2P04920 1241 aa12.49□□□□□ -0.41
RNU2-42P-201ENST00000410697 POTEHQ6S545 545 aa12.41□□□□□ -0.42
RNU2-42P-201ENST00000410697 MYCNP04198 464 aaPredicted RBP12.37□□□□□ -0.43
RNU2-42P-201ENST00000410697 C1QBPQ07021 282 aaKnown RBP12.33□□□□□ -0.44
RNU2-42P-201ENST00000410697 ATXN8OSP0DMR3 200 aa12.29□□□□□ -0.44
RNU2-42P-201ENST00000410697 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.29□□□□□ -0.44
RNU2-42P-201ENST00000410697 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.2□□□□□ -0.46
RNU2-42P-201ENST00000410697 HNRNPUL2Q1KMD3 747 aaKnown RBP12.2□□□□□ -0.46
RNU2-42P-201ENST00000410697 SAMD1Q6SPF0 538 aaPredicted RBP12.13□□□□□ -0.47
RNU2-42P-201ENST00000410697 U3KPZ7 1027 aaPredicted RBP12.09□□□□□ -0.47
RNU2-42P-201ENST00000410697 APLP2Q06481 763 aa12.02□□□□□ -0.49
RNU2-42P-201ENST00000410697 ATF5Q9Y2D1 282 aaPredicted RBP11.89□□□□□ -0.51
RNU2-42P-201ENST00000410697 ZNF219Q9P2Y4 722 aaPredicted RBP11.76□□□□□ -0.53
RNU2-42P-201ENST00000410697 FKBP8Q14318 412 aa11.65□□□□□ -0.54
RNU2-42P-201ENST00000410697 TRHP20396 242 aaPredicted RBP11.62□□□□□ -0.55
RNU2-42P-201ENST00000410697 SPINK5Q9NQ38 1064 aaPredicted RBP11.62□□□□□ -0.55
RNU2-42P-201ENST00000410697 CAPN15O75808 1086 aa11.61□□□□□ -0.55
RNU2-42P-201ENST00000410697 FBLN2P98095 1184 aa11.52□□□□□ -0.57
RNU2-42P-201ENST00000410697 POLA2Q14181 598 aa11.52□□□□□ -0.57
RNU2-42P-201ENST00000410697 ZBTB12Q9Y330 459 aaPredicted RBP11.47□□□□□ -0.57
RNU2-42P-201ENST00000410697 DSG3P32926 999 aa11.44□□□□□ -0.58
RNU2-42P-201ENST00000410697 MKRN4PQ13434 485 aaPredicted RBP11.42□□□□□ -0.58
RNU2-42P-201ENST00000410697 SPDYE4A6NLX3 237 aa11.37□□□□□ -0.59
RNU2-42P-201ENST00000410697 ABCB7O75027 752 aa11.36□□□□□ -0.59
RNU2-42P-201ENST00000410697 FBXO3Q9UK99 471 aa11.28□□□□□ -0.6
RNU2-42P-201ENST00000410697 AMER1Q5JTC6 1135 aaPredicted RBP11.27□□□□□ -0.61
RNU2-42P-201ENST00000410697 PROM2Q8N271 834 aa11.26□□□□□ -0.61
RNU2-42P-201ENST00000410697 SP7Q8TDD2 431 aaPredicted RBP11.2□□□□□ -0.62
RNU2-42P-201ENST00000410697 SPDYE2BA6NHP3 402 aa11.14□□□□□ -0.63
RNU2-42P-201ENST00000410697 SPDYE6P0CI01 402 aa11.14□□□□□ -0.63
RNU2-42P-201ENST00000410697 SPDYE2Q495Y8 402 aa11.14□□□□□ -0.63
RNU2-42P-201ENST00000410697 RTN4Q9NQC3 1192 aaKnown RBP11.12□□□□□ -0.63
RNU2-42P-201ENST00000410697 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
RNU2-42P-201ENST00000410697 CHRDL2Q6WN34 429 aa11.1□□□□□ -0.63
RNU2-42P-201ENST00000410697 OSCARQ8IYS5 282 aa11.09□□□□□ -0.63
RNU2-42P-201ENST00000410697 SSUH2Q9Y2M2 353 aa11.06□□□□□ -0.64
RNU2-42P-201ENST00000410697 VASPP50552 380 aaPredicted RBP11.02□□□□□ -0.65
RNU2-42P-201ENST00000410697 RBM42Q9BTD8 480 aaKnown RBP10.99□□□□□ -0.65
RNU2-42P-201ENST00000410697 STAG3Q9UJ98 1225 aa10.98□□□□□ -0.65
RNU2-42P-201ENST00000410697 PABPN1Q86U42 306 aaKnown RBP eCLIP10.95□□□□□ -0.66
RNU2-42P-201ENST00000410697 IFNLR1Q8IU57 520 aaPredicted RBP10.87□□□□□ -0.67
RNU2-42P-201ENST00000410697 AKT1S1Q96B36 256 aa10.81□□□□□ -0.68
RNU2-42P-201ENST00000410697 PLCD3Q8N3E9 789 aa10.79□□□□□ -0.68
RNU2-42P-201ENST00000410697 PLEKHG5O94827 1062 aa10.78□□□□□ -0.68
RNU2-42P-201ENST00000410697 KLHL34Q8N239 644 aa10.77□□□□□ -0.69
RNU2-42P-201ENST00000410697 MIER1Q8N108 512 aa10.76□□□□□ -0.69
RNU2-42P-201ENST00000410697 ZBTB47Q9UFB7 747 aaPredicted RBP10.75□□□□□ -0.69
RNU2-42P-201ENST00000410697 HAX1O00165 279 aa10.74□□□□□ -0.69
RNU2-42P-201ENST00000410697 SPDYE1Q8NFV5 336 aaPredicted RBP10.74□□□□□ -0.69
RNU2-42P-201ENST00000410697 SPOCK2Q92563 424 aa10.74□□□□□ -0.69
RNU2-42P-201ENST00000410697 PLSCR2Q9NRY7 297 aa10.69□□□□□ -0.7
RNU2-42P-201ENST00000410697 REM2Q8IYK8 340 aaPredicted RBP10.64□□□□□ -0.71
RNU2-42P-201ENST00000410697 SLC24A1O60721 1099 aa10.63□□□□□ -0.71
RNU2-42P-201ENST00000410697 PKD2Q13563 968 aa10.63□□□□□ -0.71
RNU2-42P-201ENST00000410697 PIP4P2Q8N4L2 257 aa10.63□□□□□ -0.71
RNU2-42P-201ENST00000410697 PRR29P0C7W0 189 aa10.6□□□□□ -0.71
RNU2-42P-201ENST00000410697 CLEC11AQ9Y240 323 aa10.6□□□□□ -0.71
RNU2-42P-201ENST00000410697 ECM2O94769 699 aaPredicted RBP10.53□□□□□ -0.72
RNU2-42P-201ENST00000410697 TRIM41Q8WV44 630 aa10.52□□□□□ -0.73
RNU2-42P-201ENST00000410697 LHX8Q68G74 356 aa10.5□□□□□ -0.73
RNU2-42P-201ENST00000410697 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
RNU2-42P-201ENST00000410697 DCAF8L2P0C7V8 631 aa10.49□□□□□ -0.73
RNU2-42P-201ENST00000410697 CREBZFQ9NS37 354 aa10.49□□□□□ -0.73
RNU2-42P-201ENST00000410697 GSE1Q14687 1217 aa10.48□□□□□ -0.73
RNU2-42P-201ENST00000410697 CIZ1Q9ULV3 898 aaPredicted RBP10.48□□□□□ -0.73
RNU2-42P-201ENST00000410697 EVX2Q03828 476 aa10.46□□□□□ -0.73
RNU2-42P-201ENST00000410697 MNX1P50219 401 aaPredicted RBP10.43□□□□□ -0.74
RNU2-42P-201ENST00000410697 NUBP1P53384 320 aa10.43□□□□□ -0.74
RNU2-42P-201ENST00000410697 NPM1P06748 294 aaKnown RBP eCLIP10.42□□□□□ -0.74
RNU2-42P-201ENST00000410697 FAM212AQ96EL1 285 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms