RNA–Protein interactions for RNA: ENST00000526568.5

CASP1-206, Transcript of caspase 1, humanhuman

TSL 1 (best) BASIC

Gene CASP1, Length 1,061 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP1-206ENST00000526568 AEBP2Q6ZN18 517 aaPredicted RBP24.45■■□□□ 1.5
CASP1-206ENST00000526568 CHIC1Q5VXU3 224 aa22.82■■□□□ 1.24
CASP1-206ENST00000526568 SENP3Q9H4L4 574 aaPredicted RBP20.92■□□□□ 0.94
CASP1-206ENST00000526568 PHF23Q9BUL5 403 aaPredicted RBP20.58■□□□□ 0.89
CASP1-206ENST00000526568 FOXD1Q16676 465 aa19.58■□□□□ 0.72
CASP1-206ENST00000526568 POTEDQ86YR6 584 aa19.02■□□□□ 0.64
CASP1-206ENST00000526568 MSH5O43196 834 aa18.52■□□□□ 0.56
CASP1-206ENST00000526568 PIAS4Q8N2W9 510 aaPredicted RBP18.16■□□□□ 0.5
CASP1-206ENST00000526568 PPP6R1Q9UPN7 881 aa17.9■□□□□ 0.46
CASP1-206ENST00000526568 PLPPR3Q6T4P5 718 aa17.87■□□□□ 0.45
CASP1-206ENST00000526568 ADRA2BP18089 450 aa17.8■□□□□ 0.44
CASP1-206ENST00000526568 MAPK8IP2Q13387 824 aaPredicted RBP16.51■□□□□ 0.23
CASP1-206ENST00000526568 DMRT2Q9Y5R5 561 aa16.51■□□□□ 0.23
CASP1-206ENST00000526568 SCAF1Q9H7N4 1312 aaKnown RBP16.26■□□□□ 0.19
CASP1-206ENST00000526568 CACNB1Q02641 598 aaPredicted RBP16.23■□□□□ 0.19
CASP1-206ENST00000526568 DCAF8L1A6NGE4 600 aa15.85■□□□□ 0.13
CASP1-206ENST00000526568 RNF39Q9H2S5 420 aa15.76■□□□□ 0.11
CASP1-206ENST00000526568 HOXD11P31277 338 aaPredicted RBP15.69■□□□□ 0.1
CASP1-206ENST00000526568 PPP4R3CPQ6ZMV5 832 aa15.59■□□□□ 0.09
CASP1-206ENST00000526568 C1QBPQ07021 282 aaKnown RBP15.49■□□□□ 0.07
CASP1-206ENST00000526568 CNKSR2Q8WXI2 1034 aa15.43■□□□□ 0.06
CASP1-206ENST00000526568 RNF216Q9NWF9 866 aaPredicted RBP15.42■□□□□ 0.06
CASP1-206ENST00000526568 DNAJC5BQ9UF47 199 aa15.25■□□□□ 0.03
CASP1-206ENST00000526568 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.93□□□□□ -0.02
CASP1-206ENST00000526568 NCBP3Q53F19 620 aaKnown RBP14.81□□□□□ -0.04
CASP1-206ENST00000526568 POTEHQ6S545 545 aa14.8□□□□□ -0.04
CASP1-206ENST00000526568 NPM3O75607 178 aaKnown RBP14.62□□□□□ -0.07
CASP1-206ENST00000526568 DSG3P32926 999 aa14.58□□□□□ -0.08
CASP1-206ENST00000526568 U3KPZ7 1027 aaPredicted RBP14.58□□□□□ -0.08
CASP1-206ENST00000526568 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
CASP1-206ENST00000526568 CAPN15O75808 1086 aa14.52□□□□□ -0.09
CASP1-206ENST00000526568 TRHP20396 242 aaPredicted RBP14.16□□□□□ -0.14
CASP1-206ENST00000526568 ABCB7O75027 752 aa14.14□□□□□ -0.15
CASP1-206ENST00000526568 ZNF219Q9P2Y4 722 aaPredicted RBP14.12□□□□□ -0.15
CASP1-206ENST00000526568 SLC4A2P04920 1241 aa14.11□□□□□ -0.15
CASP1-206ENST00000526568 APLP2Q06481 763 aa14.08□□□□□ -0.16
CASP1-206ENST00000526568 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.95□□□□□ -0.18
CASP1-206ENST00000526568 HNRNPUL2Q1KMD3 747 aaKnown RBP13.95□□□□□ -0.18
CASP1-206ENST00000526568 RBM42Q9BTD8 480 aaKnown RBP13.91□□□□□ -0.18
CASP1-206ENST00000526568 KCNA4P22459 653 aa13.86□□□□□ -0.19
CASP1-206ENST00000526568 SAMD1Q6SPF0 538 aaPredicted RBP13.85□□□□□ -0.19
CASP1-206ENST00000526568 CHRDL2Q6WN34 429 aa13.83□□□□□ -0.2
CASP1-206ENST00000526568 POLA2Q14181 598 aa13.65□□□□□ -0.22
CASP1-206ENST00000526568 SP7Q8TDD2 431 aaPredicted RBP13.61□□□□□ -0.23
CASP1-206ENST00000526568 EHMT2Q96KQ7 1210 aa13.6□□□□□ -0.23
CASP1-206ENST00000526568 MYCNP04198 464 aaPredicted RBP13.53□□□□□ -0.24
CASP1-206ENST00000526568 AKT1S1Q96B36 256 aa13.48□□□□□ -0.25
CASP1-206ENST00000526568 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
CASP1-206ENST00000526568 REM2Q8IYK8 340 aaPredicted RBP13.36□□□□□ -0.27
CASP1-206ENST00000526568 ZBTB12Q9Y330 459 aaPredicted RBP13.32□□□□□ -0.28
CASP1-206ENST00000526568 HAX1O00165 279 aa13.29□□□□□ -0.28
CASP1-206ENST00000526568 ATF5Q9Y2D1 282 aaPredicted RBP13.27□□□□□ -0.29
CASP1-206ENST00000526568 OSCARQ8IYS5 282 aa13.26□□□□□ -0.29
CASP1-206ENST00000526568 PITPNM1O00562 1244 aa13.23□□□□□ -0.29
CASP1-206ENST00000526568 FXR2P51116 673 aaKnown RBP eCLIP13.22□□□□□ -0.29
CASP1-206ENST00000526568 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
CASP1-206ENST00000526568 EVX2Q03828 476 aa13.1□□□□□ -0.31
CASP1-206ENST00000526568 FOXD4L1Q9NU39 408 aa13.1□□□□□ -0.31
CASP1-206ENST00000526568 SLC4A1APQ9BWU0 796 aaKnown RBP13.04□□□□□ -0.32
CASP1-206ENST00000526568 SPDYE2BA6NHP3 402 aa12.88□□□□□ -0.35
CASP1-206ENST00000526568 SPDYE6P0CI01 402 aa12.88□□□□□ -0.35
CASP1-206ENST00000526568 PRKAR2AP13861 404 aaKnown RBP12.88□□□□□ -0.35
CASP1-206ENST00000526568 SPDYE2Q495Y8 402 aa12.88□□□□□ -0.35
CASP1-206ENST00000526568 C19orf67A6NJJ6 358 aa12.81□□□□□ -0.36
CASP1-206ENST00000526568 CLEC11AQ9Y240 323 aa12.8□□□□□ -0.36
CASP1-206ENST00000526568 SPDYE1Q8NFV5 336 aaPredicted RBP12.79□□□□□ -0.36
CASP1-206ENST00000526568 FBLN2P98095 1184 aa12.77□□□□□ -0.37
CASP1-206ENST00000526568 GABBR2O75899 941 aa12.76□□□□□ -0.37
CASP1-206ENST00000526568 LHX8Q68G74 356 aa12.76□□□□□ -0.37
CASP1-206ENST00000526568 ZBTB22O15209 634 aa12.73□□□□□ -0.37
CASP1-206ENST00000526568 ATXN8OSP0DMR3 200 aa12.73□□□□□ -0.37
CASP1-206ENST00000526568 SSUH2Q9Y2M2 353 aa12.65□□□□□ -0.38
CASP1-206ENST00000526568 ZNF692Q9BU19 519 aaPredicted RBP12.64□□□□□ -0.39
CASP1-206ENST00000526568 MKRN4PQ13434 485 aaPredicted RBP12.63□□□□□ -0.39
CASP1-206ENST00000526568 CHADLQ6NUI6 762 aa12.62□□□□□ -0.39
CASP1-206ENST00000526568 PRR29P0C7W0 189 aa12.51□□□□□ -0.41
CASP1-206ENST00000526568 POTEIP0CG38 1075 aa12.5□□□□□ -0.41
CASP1-206ENST00000526568 PABPN1Q86U42 306 aaKnown RBP eCLIP12.44□□□□□ -0.42
CASP1-206ENST00000526568 CD44P16070 742 aaKnown RBP12.43□□□□□ -0.42
CASP1-206ENST00000526568 PLSCR2Q9NRY7 297 aa12.39□□□□□ -0.43
CASP1-206ENST00000526568 SLC24A1O60721 1099 aa12.38□□□□□ -0.43
CASP1-206ENST00000526568 FARP1Q9Y4F1 1045 aaPredicted RBP12.37□□□□□ -0.43
CASP1-206ENST00000526568 CLCN6P51797 869 aa12.36□□□□□ -0.43
CASP1-206ENST00000526568 DCBLD2Q96PD2 775 aa12.3□□□□□ -0.44
CASP1-206ENST00000526568 RTN4Q9NQC3 1192 aaKnown RBP12.23□□□□□ -0.45
CASP1-206ENST00000526568 ZNF579Q8NAF0 562 aaKnown RBP12.22□□□□□ -0.45
CASP1-206ENST00000526568 AMER1Q5JTC6 1135 aaPredicted RBP12.19□□□□□ -0.46
CASP1-206ENST00000526568 ZRANB1Q9UGI0 708 aa12.17□□□□□ -0.46
CASP1-206ENST00000526568 OTUD5Q96G74 571 aa12.14□□□□□ -0.47
CASP1-206ENST00000526568 GALR2O43603 387 aaPredicted RBP12.12□□□□□ -0.47
CASP1-206ENST00000526568 POTEB2H3BUK9 544 aa12.08□□□□□ -0.48
CASP1-206ENST00000526568 CREBZFQ9NS37 354 aa12.08□□□□□ -0.48
CASP1-206ENST00000526568 POTEMA6NI47 508 aa12.05□□□□□ -0.48
CASP1-206ENST00000526568 POTEGQ6S5H5 508 aa11.99□□□□□ -0.49
CASP1-206ENST00000526568 NISCHQ9Y2I1 1504 aa11.99□□□□□ -0.49
CASP1-206ENST00000526568 STAG3Q9UJ98 1225 aa11.97□□□□□ -0.49
CASP1-206ENST00000526568 PHF12Q96QT6 1004 aa11.96□□□□□ -0.49
CASP1-206ENST00000526568 PAK3O75914 559 aaPredicted RBP11.94□□□□□ -0.5
CASP1-206ENST00000526568 PELP1Q8IZL8 1130 aaKnown RBP11.93□□□□□ -0.5
CASP1-206ENST00000526568 PCDH10Q9P2E7 1040 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 103.5 ms