RNA–Protein interactions for RNA: ENST00000564269.1

AC055855.3-201, humanhuman

TSL 2 BASIC

Gene AC055855.3, Length 578 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055855.3-201ENST00000564269 AEBP2Q6ZN18 517 aaPredicted RBP21.94■■□□□ 1.1
AC055855.3-201ENST00000564269 CHIC1Q5VXU3 224 aa20.95■□□□□ 0.94
AC055855.3-201ENST00000564269 SENP3Q9H4L4 574 aaPredicted RBP18.63■□□□□ 0.57
AC055855.3-201ENST00000564269 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
AC055855.3-201ENST00000564269 FOXD1Q16676 465 aa17.38■□□□□ 0.37
AC055855.3-201ENST00000564269 PLPPR3Q6T4P5 718 aa16.79■□□□□ 0.28
AC055855.3-201ENST00000564269 PPP6R1Q9UPN7 881 aa16.4■□□□□ 0.22
AC055855.3-201ENST00000564269 ADRA2BP18089 450 aa16.36■□□□□ 0.21
AC055855.3-201ENST00000564269 PIAS4Q8N2W9 510 aaPredicted RBP16.28■□□□□ 0.2
AC055855.3-201ENST00000564269 MSH5O43196 834 aa16.16■□□□□ 0.18
AC055855.3-201ENST00000564269 POTEDQ86YR6 584 aa15.54■□□□□ 0.08
AC055855.3-201ENST00000564269 MAPK8IP2Q13387 824 aaPredicted RBP14.99□□□□□ -0.01
AC055855.3-201ENST00000564269 SCAF1Q9H7N4 1312 aaKnown RBP14.89□□□□□ -0.03
AC055855.3-201ENST00000564269 DMRT2Q9Y5R5 561 aa14.81□□□□□ -0.04
AC055855.3-201ENST00000564269 PPP4R3CPQ6ZMV5 832 aa14.77□□□□□ -0.05
AC055855.3-201ENST00000564269 CNKSR2Q8WXI2 1034 aa14.43□□□□□ -0.1
AC055855.3-201ENST00000564269 HOXD11P31277 338 aaPredicted RBP14.32□□□□□ -0.12
AC055855.3-201ENST00000564269 RNF216Q9NWF9 866 aaPredicted RBP14.25□□□□□ -0.13
AC055855.3-201ENST00000564269 DCAF8L1A6NGE4 600 aa14.23□□□□□ -0.13
AC055855.3-201ENST00000564269 NCBP3Q53F19 620 aaKnown RBP14.21□□□□□ -0.13
AC055855.3-201ENST00000564269 NPM3O75607 178 aaKnown RBP14.05□□□□□ -0.16
AC055855.3-201ENST00000564269 KCNA4P22459 653 aa13.95□□□□□ -0.18
AC055855.3-201ENST00000564269 RNF39Q9H2S5 420 aa13.83□□□□□ -0.2
AC055855.3-201ENST00000564269 CACNB1Q02641 598 aaPredicted RBP13.8□□□□□ -0.2
AC055855.3-201ENST00000564269 DNAJC5BQ9UF47 199 aa13.74□□□□□ -0.21
AC055855.3-201ENST00000564269 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.67□□□□□ -0.22
AC055855.3-201ENST00000564269 C1QBPQ07021 282 aaKnown RBP13.61□□□□□ -0.23
AC055855.3-201ENST00000564269 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
AC055855.3-201ENST00000564269 SLC4A2P04920 1241 aa13.39□□□□□ -0.27
AC055855.3-201ENST00000564269 NISCHQ9Y2I1 1504 aa13.34□□□□□ -0.27
AC055855.3-201ENST00000564269 SPINK5Q9NQ38 1064 aaPredicted RBP13.19□□□□□ -0.3
AC055855.3-201ENST00000564269 SLC4A1APQ9BWU0 796 aaKnown RBP13.18□□□□□ -0.3
AC055855.3-201ENST00000564269 CAPN15O75808 1086 aa13.13□□□□□ -0.31
AC055855.3-201ENST00000564269 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
AC055855.3-201ENST00000564269 DSG3P32926 999 aa13.01□□□□□ -0.33
AC055855.3-201ENST00000564269 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
AC055855.3-201ENST00000564269 APLP2Q06481 763 aa12.98□□□□□ -0.33
AC055855.3-201ENST00000564269 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
AC055855.3-201ENST00000564269 TRHP20396 242 aaPredicted RBP12.97□□□□□ -0.33
AC055855.3-201ENST00000564269 SAMD1Q6SPF0 538 aaPredicted RBP12.97□□□□□ -0.33
AC055855.3-201ENST00000564269 FOXD4L1Q9NU39 408 aa12.93□□□□□ -0.34
AC055855.3-201ENST00000564269 ZNF219Q9P2Y4 722 aaPredicted RBP12.91□□□□□ -0.34
AC055855.3-201ENST00000564269 ABCB7O75027 752 aa12.88□□□□□ -0.35
AC055855.3-201ENST00000564269 ZBTB22O15209 634 aa12.84□□□□□ -0.35
AC055855.3-201ENST00000564269 ATF5Q9Y2D1 282 aaPredicted RBP12.71□□□□□ -0.37
AC055855.3-201ENST00000564269 POLA2Q14181 598 aa12.65□□□□□ -0.38
AC055855.3-201ENST00000564269 ATXN8OSP0DMR3 200 aa12.48□□□□□ -0.41
AC055855.3-201ENST00000564269 CSRNP3Q8WYN3 585 aa12.38□□□□□ -0.43
AC055855.3-201ENST00000564269 RBM42Q9BTD8 480 aaKnown RBP12.37□□□□□ -0.43
AC055855.3-201ENST00000564269 ZBTB12Q9Y330 459 aaPredicted RBP12.35□□□□□ -0.43
AC055855.3-201ENST00000564269 EHMT2Q96KQ7 1210 aa12.33□□□□□ -0.44
AC055855.3-201ENST00000564269 OSCARQ8IYS5 282 aa12.26□□□□□ -0.45
AC055855.3-201ENST00000564269 POTEHQ6S545 545 aa12.2□□□□□ -0.46
AC055855.3-201ENST00000564269 ABCC9O60706 1549 aa12.18□□□□□ -0.46
AC055855.3-201ENST00000564269 FBLN2P98095 1184 aa12.14□□□□□ -0.47
AC055855.3-201ENST00000564269 AKT1S1Q96B36 256 aa12.14□□□□□ -0.47
AC055855.3-201ENST00000564269 MKRN4PQ13434 485 aaPredicted RBP12.13□□□□□ -0.47
AC055855.3-201ENST00000564269 CHRDL2Q6WN34 429 aa12.07□□□□□ -0.48
AC055855.3-201ENST00000564269 REM2Q8IYK8 340 aaPredicted RBP12.05□□□□□ -0.48
AC055855.3-201ENST00000564269 SPDYE2BA6NHP3 402 aa12□□□□□ -0.49
AC055855.3-201ENST00000564269 SPDYE6P0CI01 402 aa12□□□□□ -0.49
AC055855.3-201ENST00000564269 SPDYE2Q495Y8 402 aa12□□□□□ -0.49
AC055855.3-201ENST00000564269 CCDC180Q9P1Z9 1646 aa11.94□□□□□ -0.5
AC055855.3-201ENST00000564269 PITPNM1O00562 1244 aa11.93□□□□□ -0.5
AC055855.3-201ENST00000564269 ZNF692Q9BU19 519 aaPredicted RBP11.91□□□□□ -0.5
AC055855.3-201ENST00000564269 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
AC055855.3-201ENST00000564269 PIP4P2Q8N4L2 257 aa11.83□□□□□ -0.52
AC055855.3-201ENST00000564269 FXR2P51116 673 aaKnown RBP eCLIP11.77□□□□□ -0.53
AC055855.3-201ENST00000564269 CLEC11AQ9Y240 323 aa11.77□□□□□ -0.53
AC055855.3-201ENST00000564269 SPDYE1Q8NFV5 336 aaPredicted RBP11.76□□□□□ -0.53
AC055855.3-201ENST00000564269 PABPN1Q86U42 306 aaKnown RBP eCLIP11.75□□□□□ -0.53
AC055855.3-201ENST00000564269 PRKAR2AP13861 404 aaKnown RBP11.62□□□□□ -0.55
AC055855.3-201ENST00000564269 SPDYE4A6NLX3 237 aa11.61□□□□□ -0.55
AC055855.3-201ENST00000564269 HAX1O00165 279 aa11.57□□□□□ -0.56
AC055855.3-201ENST00000564269 PRR29P0C7W0 189 aa11.57□□□□□ -0.56
AC055855.3-201ENST00000564269 CHADLQ6NUI6 762 aa11.55□□□□□ -0.56
AC055855.3-201ENST00000564269 SP7Q8TDD2 431 aaPredicted RBP11.51□□□□□ -0.57
AC055855.3-201ENST00000564269 RB1CC1Q8TDY2 1594 aa11.49□□□□□ -0.57
AC055855.3-201ENST00000564269 EVX2Q03828 476 aa11.48□□□□□ -0.57
AC055855.3-201ENST00000564269 STAG3Q9UJ98 1225 aa11.41□□□□□ -0.58
AC055855.3-201ENST00000564269 C19orf67A6NJJ6 358 aa11.39□□□□□ -0.59
AC055855.3-201ENST00000564269 NACADO15069 1562 aa11.38□□□□□ -0.59
AC055855.3-201ENST00000564269 DCAF8L2P0C7V8 631 aa11.36□□□□□ -0.59
AC055855.3-201ENST00000564269 FARP1Q9Y4F1 1045 aaPredicted RBP11.36□□□□□ -0.59
AC055855.3-201ENST00000564269 CREBZFQ9NS37 354 aa11.35□□□□□ -0.59
AC055855.3-201ENST00000564269 PROM2Q8N271 834 aa11.34□□□□□ -0.59
AC055855.3-201ENST00000564269 CD44P16070 742 aaKnown RBP11.25□□□□□ -0.61
AC055855.3-201ENST00000564269 FKBP8Q14318 412 aa11.22□□□□□ -0.61
AC055855.3-201ENST00000564269 MYO15BQ96JP2 1530 aa11.2□□□□□ -0.62
AC055855.3-201ENST00000564269 GABBR2O75899 941 aa11.19□□□□□ -0.62
AC055855.3-201ENST00000564269 BICRAQ9NZM4 1560 aa11.17□□□□□ -0.62
AC055855.3-201ENST00000564269 MNX1P50219 401 aaPredicted RBP11.17□□□□□ -0.62
AC055855.3-201ENST00000564269 UNC13AQ9UPW8 1703 aa11.13□□□□□ -0.63
AC055855.3-201ENST00000564269 ZRANB1Q9UGI0 708 aa11.13□□□□□ -0.63
AC055855.3-201ENST00000564269 NPM1P06748 294 aaKnown RBP eCLIP11.1□□□□□ -0.63
AC055855.3-201ENST00000564269 ZNF579Q8NAF0 562 aaKnown RBP11.08□□□□□ -0.64
AC055855.3-201ENST00000564269 MIER1Q8N108 512 aa11.06□□□□□ -0.64
AC055855.3-201ENST00000564269 PAK3O75914 559 aaPredicted RBP11.03□□□□□ -0.64
AC055855.3-201ENST00000564269 ZCCHC6Q5VYS8 1495 aaKnown RBP11.01□□□□□ -0.65
AC055855.3-201ENST00000564269 PHF12Q96QT6 1004 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms