Protein–RNA interactions for Protein: O43364

HOXA2, Homeobox protein Hox-A2, humanhuman

Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA2O43364 RNU6-1090P-201ENST00000364065 94 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 RNA5SP355-201ENST00000365317 135 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 FAM107B-203ENST00000378462 692 ntAPPRIS P1 TSL 3 BASIC8.46□□□□□ -1.06
HOXA2O43364 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC8.46□□□□□ -1.06
HOXA2O43364 HMGB3P1-201ENST00000393368 573 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 MTCYBP36-201ENST00000404146 440 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 AL356776.1-201ENST00000406574 447 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXA2O43364 ABCC13-201ENST00000429114 611 ntTSL 3 BASIC8.46□□□□□ -1.06
HOXA2O43364 AC073464.1-201ENST00000429823 534 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 DDX11L10-201ENST00000430178 571 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC8.46□□□□□ -1.06
HOXA2O43364 AC009988.1-201ENST00000434988 310 ntTSL 5 BASIC8.46□□□□□ -1.06
HOXA2O43364 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 AL136454.1-201ENST00000443181 466 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 AL353803.3-201ENST00000444641 335 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 SORCS3-AS1-201ENST00000449805 1278 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 AL157400.2-201ENST00000454174 563 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXA2O43364 AL592464.2-201ENST00000457440 607 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXA2O43364 AC073648.3-201ENST00000504939 925 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXA2O43364 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC8.46□□□□□ -1.06
HOXA2O43364 PAICSP4-201ENST00000517543 1253 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 AP001257.1-201ENST00000533106 385 ntTSL 3 BASIC8.46□□□□□ -1.06
HOXA2O43364 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC8.46□□□□□ -1.06
HOXA2O43364 COX6CP11-201ENST00000555293 229 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 HMGB1P33-201ENST00000563485 527 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 AC022558.2-201ENST00000566841 754 ntTSL 5 BASIC8.46□□□□□ -1.06
HOXA2O43364 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 SKA2-203ENST00000578105 689 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXA2O43364 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXA2O43364 RPS28P1-201ENST00000604589 187 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 IGKV1OR1-1-201ENST00000613775 347 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 FAM27E3-202ENST00000614611 340 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 BX005040.2-201ENST00000620504 370 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 AC007342.8-201ENST00000623278 678 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 AC017000.1-201ENST00000639380 578 ntTSL 5 BASIC8.46□□□□□ -1.06
HOXA2O43364 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 WDPCP-204ENST00000409199 2466 ntTSL 2 BASIC8.46□□□□□ -1.06
HOXA2O43364 SSXP3-201ENST00000442971 1300 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 LINC02128-205ENST00000641755 1334 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 GABRA1-219ENST00000638112 2818 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
HOXA2O43364 XRCC5-202ENST00000392133 3761 ntAPPRIS P1 TSL 5 BASIC8.46□□□□□ -1.06
HOXA2O43364 FCRL4-201ENST00000271532 3459 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 XIST-206ENST00000434839 2865 ntTSL 5 BASIC8.46□□□□□ -1.06
HOXA2O43364 MUC3A-203ENST00000483366 9944 ntAPPRIS ALT2 TSL 5 BASIC8.46□□□□□ -1.06
HOXA2O43364 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 LRP6-206ENST00000543091 4774 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 ANKRD20A5P-201ENST00000431648 3556 ntBASIC8.46□□□□□ -1.06
HOXA2O43364 AC139491.2-201ENST00000515403 3632 ntTSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 DYNC1I1-206ENST00000457059 2393 ntAPPRIS ALT1 TSL 1 (best) BASIC8.46□□□□□ -1.06
HOXA2O43364 CCNB3-204ENST00000376042 4693 ntAPPRIS P1 TSL 2 BASIC8.45□□□□□ -1.06
HOXA2O43364 SLC11A2-212ENST00000547688 2401 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 CCDC66-203ENST00000394672 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 VWA5A-205ENST00000456829 4388 ntAPPRIS P4 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 ERMAP-203ENST00000372517 3423 ntAPPRIS P2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 OR7E11P-202ENST00000642027 1491 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC073342.2-201ENST00000595842 1800 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 TMEM182-203ENST00000412401 3593 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 PAPPA-AS2-201ENST00000438048 1854 ntTSL 2 BASIC8.45□□□□□ -1.06
HOXA2O43364 ZMYND11-215ENST00000558098 1859 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 RAB2B-201ENST00000397762 2928 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 ENY2-211ENST00000521688 2922 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 GPM6B-201ENST00000316715 3275 ntAPPRIS ALT1 TSL 2 BASIC8.45□□□□□ -1.06
HOXA2O43364 SEC23IP-201ENST00000369075 7168 ntAPPRIS P1 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 LDB2-203ENST00000502640 2626 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 PPFIA2-220ENST00000550584 5405 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 TNPO3-202ENST00000471166 3019 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 AC068044.1-201ENST00000441585 1978 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 TMPRSS4-219ENST00000616579 3417 ntAPPRIS ALT2 TSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 RPL10P16-201ENST00000325000 645 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 HHLA3-201ENST00000359875 898 ntAPPRIS ALT2 TSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 RNA5SP88-201ENST00000365560 109 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 SNORA51.7-201ENST00000384171 134 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 SNORD15A-201ENST00000384214 148 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 Y_RNA.529-201ENST00000384586 119 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 RN7SKP236-201ENST00000410635 284 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC093698.1-201ENST00000423843 571 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 OFD1P12Y-201ENST00000427963 1207 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AL512649.1-201ENST00000428997 581 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC005534.2-201ENST00000431047 433 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 LINC01723-201ENST00000432244 601 ntTSL 2 BASIC8.45□□□□□ -1.06
HOXA2O43364 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.45□□□□□ -1.06
HOXA2O43364 PCNPP2-201ENST00000441651 455 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 BMS1P10-201ENST00000443754 1120 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC093157.1-202ENST00000446527 1045 ntTSL 3 BASIC8.45□□□□□ -1.06
HOXA2O43364 LINC00652-202ENST00000454749 963 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 ARPC3P2-201ENST00000457786 533 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 LINC00489-201ENST00000457816 543 ntTSL 5 BASIC8.45□□□□□ -1.06
HOXA2O43364 RN7SL55P-201ENST00000464534 297 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC087385.2-201ENST00000477729 498 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 ZNF695-204ENST00000487338 826 ntTSL 1 (best) BASIC8.45□□□□□ -1.06
HOXA2O43364 AC097263.1-201ENST00000496795 606 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 ZBED3-AS1-203ENST00000504506 702 ntTSL 3 BASIC8.45□□□□□ -1.06
HOXA2O43364 LINC02360-201ENST00000506195 657 ntTSL 3 BASIC8.45□□□□□ -1.06
HOXA2O43364 AC098487.1-204ENST00000506972 610 ntTSL 3 BASIC8.45□□□□□ -1.06
HOXA2O43364 AC108078.1-201ENST00000508073 725 ntBASIC8.45□□□□□ -1.06
HOXA2O43364 AC026434.1-201ENST00000511474 454 ntTSL 3 BASIC8.45□□□□□ -1.06
Retrieved 100 of 98,524 protein–RNA pairs in 160.7 ms