Protein–RNA interactions for Protein: Q9UPN3

MACF1, Microtubule-actin cross-linking factor 1, isoforms 1/2/3/5, humanhuman

Known RBP Predictions only

Length 7,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1Q9UPN3 OR5M8-201ENST00000327216 1047 ntAPPRIS P1 BASIC2.34□□□□□ -2.04
MACF1Q9UPN3 AC074011.1-201ENST00000431376 581 ntTSL 4 BASIC2.34□□□□□ -2.04
MACF1Q9UPN3 HTATIP2-207ENST00000532081 774 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
MACF1Q9UPN3 LINC00871-201ENST00000555246 408 ntTSL 5 BASIC2.34□□□□□ -2.04
MACF1Q9UPN3 AC027229.1-201ENST00000583887 253 ntBASIC2.34□□□□□ -2.04
MACF1Q9UPN3 AL512782.1-201ENST00000603093 364 ntBASIC2.34□□□□□ -2.04
MACF1Q9UPN3 RNA5SP196-201ENST00000625967 102 ntBASIC2.34□□□□□ -2.04
MACF1Q9UPN3 AL596244.1-201ENST00000567068 3779 ntBASIC2.34□□□□□ -2.04
MACF1Q9UPN3 RERE-201ENST00000337907 8026 ntAPPRIS P2 TSL 1 (best) BASIC2.34□□□□□ -2.04
MACF1Q9UPN3 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC2.34□□□□□ -2.04
MACF1Q9UPN3 GPR161-201ENST00000271357 7806 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
MACF1Q9UPN3 LTBP1-202ENST00000404525 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AL078621.3-201ENST00000623707 2042 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 ARL6-204ENST00000463745 4231 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 CEACAM1-207ENST00000403444 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 OFD1P8Y-201ENST00000449148 1433 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 DSTYK-202ENST00000367162 7874 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 RNA5SP191-201ENST00000362585 102 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC092637.1-201ENST00000444745 510 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC144548.2-201ENST00000550231 946 ntTSL 3 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 FOPNL-208ENST00000575744 565 ntTSL 4 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 KPNA2P3-201ENST00000584190 848 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 DOPEY2-202ENST00000399151 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 MPP7-201ENST00000337532 5080 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 GPATCH8-208ENST00000591680 4692 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 COL4A6-202ENST00000372216 6570 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 RNF4-214ENST00000511600 4123 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 PSMC6-219ENST00000612399 1590 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 GREB1-204ENST00000381486 8484 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 MCM10-206ENST00000484800 3157 ntAPPRIS P4 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 RN7SKP95-201ENST00000362860 303 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AL390774.1-201ENST00000411924 246 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC114755.5-201ENST00000447760 831 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AP003501.1-201ENST00000524453 744 ntTSL 3 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC006581.1-201ENST00000545706 496 ntTSL 3 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 BDH2P1-201ENST00000602288 736 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC008280.3-201ENST00000606436 732 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AHCTF1-202ENST00000366508 8751 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 CDC42BPA-203ENST00000366766 10610 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 ASPA-201ENST00000263080 5431 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 COL4A6-210ENST00000621266 6627 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 FOXN3-202ENST00000345097 7832 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 LINC01677-204ENST00000635342 1329 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 SYNJ1-202ENST00000382491 6958 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 MAPK8-201ENST00000360332 5438 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 RNA5SP447-201ENST00000363749 119 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 MIR433-201ENST00000384837 93 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 RPS3AP12-201ENST00000443616 753 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 MIR2116-201ENST00000517221 80 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AL513283.1-203ENST00000640010 891 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 SRRM4-201ENST00000267260 8477 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 C10orf67-204ENST00000636213 3981 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 ARG1-203ENST00000368087 1532 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 VCL-202ENST00000372755 6489 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 GIT2-203ENST00000355312 5466 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 COL11A1-201ENST00000353414 7173 ntAPPRIS ALT1 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 LUZP1-201ENST00000302291 8898 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 EOGT-201ENST00000295571 4138 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 USP45-204ENST00000369233 2514 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 BAAT-201ENST00000259407 3377 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 MBNL3-201ENST00000370839 1575 ntAPPRIS ALT1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 PTMAP2-201ENST00000397627 327 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 RPS4XP20-201ENST00000505751 772 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 IGHV3-57-201ENST00000520143 280 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 OR4A21P-201ENST00000532759 944 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 LINC01269-201ENST00000553682 602 ntTSL 4 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 Metazoa_SRP.181-201ENST00000616636 288 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC096861.1-201ENST00000616652 240 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AL137067.2-201ENST00000621202 131 ntBASIC2.33□□□□□ -2.04
MACF1Q9UPN3 VAMP4-201ENST00000236192 5159 ntAPPRIS P3 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 ERG-204ENST00000398907 4809 ntTSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
MACF1Q9UPN3 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms