RNA–Protein interactions for RNA: ENST00000404525.5

LTBP1-202, Transcript of latent transforming growth factor beta binding protein 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LTBP1, Length 5,092 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP1-202ENST00000404525 NISCHQ9Y2I1 1504 aa15.33■□□□□ 0.04
LTBP1-202ENST00000404525 DCAF8L2P0C7V8 631 aa14.2□□□□□ -0.14
LTBP1-202ENST00000404525 SHROOM4Q9ULL8 1493 aa13.38□□□□□ -0.27
LTBP1-202ENST00000404525 SUPT5HO00267 1087 aaKnown RBP13.18□□□□□ -0.3
LTBP1-202ENST00000404525 CCDC180Q9P1Z9 1646 aa13.14□□□□□ -0.31
LTBP1-202ENST00000404525 ABCC9O60706 1549 aa13.13□□□□□ -0.31
LTBP1-202ENST00000404525 HRCP23327 699 aa13.05□□□□□ -0.32
LTBP1-202ENST00000404525 PELP1Q8IZL8 1130 aaKnown RBP13.02□□□□□ -0.33
LTBP1-202ENST00000404525 PCGF6Q9BYE7 350 aa12.92□□□□□ -0.34
LTBP1-202ENST00000404525 ZCCHC6Q5VYS8 1495 aaKnown RBP12.75□□□□□ -0.37
LTBP1-202ENST00000404525 PPARGC1BQ86YN6 1023 aaKnown RBP12.72□□□□□ -0.37
LTBP1-202ENST00000404525 MYT1Q01538 1121 aa12.65□□□□□ -0.38
LTBP1-202ENST00000404525 PABPN1Q86U42 306 aaKnown RBP eCLIP12.63□□□□□ -0.39
LTBP1-202ENST00000404525 RB1CC1Q8TDY2 1594 aa12.6□□□□□ -0.39
LTBP1-202ENST00000404525 ZEB1P37275 1124 aaPredicted RBP12.56□□□□□ -0.4
LTBP1-202ENST00000404525 EHMT2Q96KQ7 1210 aa12.56□□□□□ -0.4
LTBP1-202ENST00000404525 NACADO15069 1562 aa12.55□□□□□ -0.4
LTBP1-202ENST00000404525 CHIC1Q5VXU3 224 aa12.52□□□□□ -0.4
LTBP1-202ENST00000404525 SCRIBQ14160 1630 aa12.52□□□□□ -0.41
LTBP1-202ENST00000404525 TRIM26Q12899 539 aaPredicted RBP12.47□□□□□ -0.41
LTBP1-202ENST00000404525 DCAF1Q9Y4B6 1507 aa12.43□□□□□ -0.42
LTBP1-202ENST00000404525 APLP2Q06481 763 aa12.41□□□□□ -0.42
LTBP1-202ENST00000404525 TRIM41Q8WV44 630 aa12.38□□□□□ -0.43
LTBP1-202ENST00000404525 CENPBP07199 599 aaPredicted RBP12.32□□□□□ -0.44
LTBP1-202ENST00000404525 MYO15BQ96JP2 1530 aa12.32□□□□□ -0.44
LTBP1-202ENST00000404525 FAM9AQ8IZU1 332 aaPredicted RBP12.3□□□□□ -0.44
LTBP1-202ENST00000404525 LOC105371045A0A1W2PR82 267 aa12.3□□□□□ -0.44
LTBP1-202ENST00000404525 SCAF1Q9H7N4 1312 aaKnown RBP12.29□□□□□ -0.44
LTBP1-202ENST00000404525 TTBK1Q5TCY1 1321 aaPredicted RBP12.17□□□□□ -0.46
LTBP1-202ENST00000404525 ACIN1Q9UKV3 1341 aaKnown RBP12.14□□□□□ -0.47
LTBP1-202ENST00000404525 CCER1Q8TC90 406 aaPredicted RBP12.11□□□□□ -0.47
LTBP1-202ENST00000404525 GTF3C3Q9Y5Q9 886 aa12.1□□□□□ -0.47
LTBP1-202ENST00000404525 UBTFP17480 764 aaKnown RBP12.08□□□□□ -0.48
LTBP1-202ENST00000404525 ERICH6Q7L0X2 663 aa12.04□□□□□ -0.48
LTBP1-202ENST00000404525 RANGAP1P46060 587 aaPredicted RBP12.03□□□□□ -0.48
LTBP1-202ENST00000404525 BAZ1AQ9NRL2 1556 aaPredicted RBP12.02□□□□□ -0.49
LTBP1-202ENST00000404525 NEUROD1Q13562 356 aa12.01□□□□□ -0.49
LTBP1-202ENST00000404525 DIEXFQ68CQ4 756 aaKnown RBP12.01□□□□□ -0.49
LTBP1-202ENST00000404525 RSF1Q96T23 1441 aaPredicted RBP11.98□□□□□ -0.49
LTBP1-202ENST00000404525 YTHDC1Q96MU7 727 aaKnown RBP11.96□□□□□ -0.5
LTBP1-202ENST00000404525 BAZ1BQ9UIG0 1483 aaKnown RBP11.95□□□□□ -0.5
LTBP1-202ENST00000404525 ATP1B4Q9UN42 357 aaPredicted RBP11.93□□□□□ -0.5
LTBP1-202ENST00000404525 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.92□□□□□ -0.5
LTBP1-202ENST00000404525 CECR2Q9BXF3 1484 aa11.91□□□□□ -0.5
LTBP1-202ENST00000404525 NEFLP07196 543 aa11.9□□□□□ -0.5
LTBP1-202ENST00000404525 SMARCA2P51531 1590 aa11.84□□□□□ -0.51
LTBP1-202ENST00000404525 MROH2BQ7Z745 1585 aa11.8□□□□□ -0.52
LTBP1-202ENST00000404525 ZNF316A6NFI3 1004 aaPredicted RBP11.73□□□□□ -0.53
LTBP1-202ENST00000404525 SMARCA4P51532 1647 aa11.73□□□□□ -0.53
LTBP1-202ENST00000404525 FBLN2P98095 1184 aa11.72□□□□□ -0.53
LTBP1-202ENST00000404525 HNRNPUL2Q1KMD3 747 aaKnown RBP11.71□□□□□ -0.53
LTBP1-202ENST00000404525 CSRNP3Q8WYN3 585 aa11.69□□□□□ -0.54
LTBP1-202ENST00000404525 ATAD2BQ9ULI0 1458 aa11.67□□□□□ -0.54
LTBP1-202ENST00000404525 TOP2AP11388 1531 aaKnown RBP11.67□□□□□ -0.54
LTBP1-202ENST00000404525 WIZO95785 1651 aa11.67□□□□□ -0.54
LTBP1-202ENST00000404525 ERCC6Q03468 1493 aa11.67□□□□□ -0.54
LTBP1-202ENST00000404525 WRNQ14191 1432 aaPredicted RBP eCLIP11.63□□□□□ -0.55
LTBP1-202ENST00000404525 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
LTBP1-202ENST00000404525 EIF4G1Q04637 1599 aaKnown RBP11.61□□□□□ -0.55
LTBP1-202ENST00000404525 CLSPNQ9HAW4 1339 aa11.59□□□□□ -0.55
LTBP1-202ENST00000404525 PDS5BQ9NTI5 1447 aa11.59□□□□□ -0.55
LTBP1-202ENST00000404525 MIER1Q8N108 512 aa11.55□□□□□ -0.56
LTBP1-202ENST00000404525 ITGAEP38570 1179 aa11.55□□□□□ -0.56
LTBP1-202ENST00000404525 BICRAQ9NZM4 1560 aa11.54□□□□□ -0.56
LTBP1-202ENST00000404525 EEA1Q15075 1411 aa11.54□□□□□ -0.56
LTBP1-202ENST00000404525 NCAPD3P42695 1498 aa11.54□□□□□ -0.56
LTBP1-202ENST00000404525 CADPSQ9ULU8 1353 aa11.53□□□□□ -0.56
LTBP1-202ENST00000404525 ANP32EQ9BTT0 268 aa11.53□□□□□ -0.56
LTBP1-202ENST00000404525 DAXXQ9UER7 740 aaPredicted RBP11.52□□□□□ -0.56
LTBP1-202ENST00000404525 CHMP7Q8WUX9 453 aaPredicted RBP11.51□□□□□ -0.57
LTBP1-202ENST00000404525 KIF27Q86VH2 1401 aa11.5□□□□□ -0.57
LTBP1-202ENST00000404525 MYT1LQ9UL68 1186 aa11.5□□□□□ -0.57
LTBP1-202ENST00000404525 BCL11AQ9H165 835 aa11.49□□□□□ -0.57
LTBP1-202ENST00000404525 UNC13AQ9UPW8 1703 aa11.49□□□□□ -0.57
LTBP1-202ENST00000404525 CC2D2AQ9P2K1 1620 aa11.47□□□□□ -0.57
LTBP1-202ENST00000404525 P3H3Q8IVL6 736 aa11.46□□□□□ -0.57
LTBP1-202ENST00000404525 POLR3GLQ9BT43 218 aa11.45□□□□□ -0.58
LTBP1-202ENST00000404525 CEP164Q9UPV0 1460 aa11.43□□□□□ -0.58
LTBP1-202ENST00000404525 HMGXB3Q12766 1538 aa11.42□□□□□ -0.58
LTBP1-202ENST00000404525 SUPT16HQ9Y5B9 1047 aaKnown RBP11.41□□□□□ -0.58
LTBP1-202ENST00000404525 CDK11AQ9UQ88 783 aaPredicted RBP11.41□□□□□ -0.58
LTBP1-202ENST00000404525 GOLGA3Q08378 1498 aa11.39□□□□□ -0.59
LTBP1-202ENST00000404525 BCANQ96GW7 911 aa11.39□□□□□ -0.59
LTBP1-202ENST00000404525 ABCC8Q09428 1581 aa11.39□□□□□ -0.59
LTBP1-202ENST00000404525 CUX2O14529 1486 aa11.39□□□□□ -0.59
LTBP1-202ENST00000404525 FANCD2Q9BXW9 1451 aa11.39□□□□□ -0.59
LTBP1-202ENST00000404525 SOGA1O94964 1423 aa11.37□□□□□ -0.59
LTBP1-202ENST00000404525 FAM50AQ14320 339 aaKnown RBP11.36□□□□□ -0.59
LTBP1-202ENST00000404525 NPM1P06748 294 aaKnown RBP eCLIP11.36□□□□□ -0.59
LTBP1-202ENST00000404525 ARID3CA6NKF2 412 aa11.33□□□□□ -0.6
LTBP1-202ENST00000404525 RTL5Q5HYW3 569 aaPredicted RBP11.33□□□□□ -0.6
LTBP1-202ENST00000404525 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
LTBP1-202ENST00000404525 CNGB1Q14028 1251 aaPredicted RBP11.32□□□□□ -0.6
LTBP1-202ENST00000404525 CLIP1P30622 1438 aa11.31□□□□□ -0.6
LTBP1-202ENST00000404525 CARMIL1Q5VZK9 1371 aa11.31□□□□□ -0.6
LTBP1-202ENST00000404525 FKBP8Q14318 412 aa11.29□□□□□ -0.6
LTBP1-202ENST00000404525 CEP162Q5TB80 1403 aa11.28□□□□□ -0.6
LTBP1-202ENST00000404525 CFTRP13569 1480 aa11.27□□□□□ -0.6
LTBP1-202ENST00000404525 TDRD9Q8NDG6 1382 aaKnown RBP11.27□□□□□ -0.61
LTBP1-202ENST00000404525 TNIKQ9UKE5 1360 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 76.6 ms